Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0301 ATGGATACCTTGTTTCGCCTAGTCACTTTTCAACCTCAACCTGATCCTCATTCTCTCAACAACTCTTCTAGTAGAACTTCTAGCAGCTCCAGATCCTCCAGACAAAACAATAACAACAACAACCATCATCATCATCATCACTACCAGCAGCAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGACGACTTGTCCTCGTCTTCTTCTAGGCAGTATTATCCTTATCAACCTCATAATCCTTCCTCCTCCGCCACCCCTACCGCCACCGCTGTTTCTACTTTCACCACTACCACTCCCACCGCTTCTGATTTCTCTTTCTCCCTCTCCCCCGCAGCGCCTGACCTCCATGCCTTTGAATTCTCCGGCCGCTGGGCTCACGATCTCCTCCTCGAAACCGCCCGTGCCGTTGCCGACAAGAACAGCGCTCGTGTCCAGCAGTTAATTTGGATGCTCAACGAGCTCGCCAGTCCCTATGGCGACATCGATCAGAAGCTCGCCGCTTACTTCCTTCAGGCCTTGTTCAGTCGTGTCACCGACTCCGGCGACCGCACCTACCGTACTTTGGCATCCGCGTCGGACAAAACTTGCTCTTTTGAGTCCACCAGGAAGATGGTCTTGAAGTTCCAGGAGGTCAGCCCTTGGACTACTTTCGGTCACGTCGCTTCCAATGGCGCCATATTGGAGGCCTTAGAAGGTGAGCCCAAGTTGCACATCGTCGATATTAGCGATACGTATTGCACCCAGTGGCCGACTCTTCTTGAAGCCTTGGCCACTCGCAGCGATGACACCCCGCACCTCCGGTTAACCACGGTGGTTAGCCGCCGAGCCGGTGGCTCTGTCGCTGCTGTTCAGAAAGTCATGAAGGAAATAGGGACTAGAATGGAGAAGTTCGCTCGGCTCATGGGCGTCCCCTTTAAATTCAACGTCATTCATCACGCGGGTGATCTCTCGGACTTTAATTTCTCGGAATTGGAAATCAAAGACGACGAGGCTCTCGCCATTAATTGTGTTAACGCGTTGCATTCTATCACAGCCTTTGGTAATAATCGTGACGTATTGATCTCCTCGTTTCGGAGATTGCAACCTAGGATAGTCACTGTCGTGGAAGAGGAAGCTGATCTTGATGTCGGATTTCATGGGTTTGAGTTTGTACGAGGTTTCCAAGAATGCTTGAGGTGGTTTAGGGTTTACTTCGAGGCACTGGAGGAGAGCTTCCCCCACGCAAGCAACGAGCGTTTGATGCTCGAGCGAGCTGCGGGACGAGCCATCGTTGACTTGGTGGCTTGTGAGCCAGCGCAGTCGGTGGAACGGCGGGAGACGGCAGCAAGATGGTCGCAGCGGCTGCATGGAAGTGGGCTCAATGTGGTGCCGTTTAGCGATGAGGTTTCCGACGACGTGAGAGCGCTGTTGAGGAGGTACAAGGAGGGATGGGCAATAACACATTGCTCCGACGCCGGAATATTCTTGGCCTGGAAGGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTGA 1521 0.5286 MDTLFRLVTFQPQPDPHSLNNSSSRTSSSSRSSRQNNNNNNHHHHHHYQQQEDEECFNFFMDEDDLSSSSSRQYYPYQPHNPSSSATPTATAVSTFTTTTPTASDFSFSLSPAAPDLHAFEFSGRWAHDLLLETARAVADKNSARVQQLIWMLNELASPYGDIDQKLAAYFLQALFSRVTDSGDRTYRTLASASDKTCSFESTRKMVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISDTYCTQWPTLLEALATRSDDTPHLRLTTVVSRRAGGSVAAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSDFNFSELEIKDDEALAINCVNALHSITAFGNNRDVLISSFRRLQPRIVTVVEEEADLDVGFHGFEFVRGFQECLRWFRVYFEALEESFPHASNERLMLERAAGRAIVDLVACEPAQSVERRETAARWSQRLHGSGLNVVPFSDEVSDDVRALLRRYKEGWAITHCSDAGIFLAWKEQPVVWASAWRP 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0301 506 MobiDBLite consensus disorder prediction 8 52 - -
Prci5g0301 506 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 495 IPR005202 -
Prci5g0301 506 Pfam GRAS domain family 129 505 IPR005202 -
Prci5g0301 506 ProSiteProfiles GRAS family profile. 118 505 IPR005202 -
Prci5g0301 506 MobiDBLite consensus disorder prediction 13 37 - -
Prci5g0301 506 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0301 Prci-Chr5 4180016 4182087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0301 1 506 GRAS Transcription Factor Family AT4G37650 60.861 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci5g0301 GRAS 7.9e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0301 - - qsa:O6P43_033912 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0301 5 4180016 4182087 Prci5g0301 5 4180016 4182087 ECH