Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0295 ATGAAGTACAATCCGAGAGTTTCCAGCTCTCGCCGCAAGAACCGGAAGGCCCACTTTACGGCGCCTTCGAGTGTTCGGCGTGTGATTATGAGCGCGCCGCTCTCGAATGACCTCCGCTCAAAGTACAACGTGAGATCCATGCCCGTTCGCAAAGACGATGAGGTTCAGGTTGTTCGAGGTACCTACAAGGGACGTGAGGGTAAGGTCGTTCAAGTTTACCGTCGAAAATGGGTCATCCATATCGAGCGGATTACCCGCGAGAAGGTAAATGGACAAACCGTCAATGTTGGGATCAATCCATCAAAAGTGGTGATTACGAAGCTGAGGCTGGATAAGGATCGCAAGTCATTGCTTGATCGCAAGGCTAAGGGTCGTGCGGCTGCTGACAAGGACAAGGGAACCAAATTCACTGCTGAGGACATTATGCAAAGTGTTGATTAG 441 0.5079 MKYNPRVSSSRRKNRKAHFTAPSSVRRVIMSAPLSNDLRSKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGQTVNVGINPSKVVITKLRLDKDRKSLLDRKAKGRAAADKDKGTKFTAEDIMQSVD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0295 146 ProSitePatterns Ribosomal protein L24 signature. 52 69 IPR005825 GO:0003735|GO:0005840|GO:0006412
Prci5g0295 146 SUPERFAMILY Translation proteins SH3-like domain 8 125 IPR008991 -
Prci5g0295 146 Pfam KOW motif 51 82 IPR005824 -
Prci5g0295 146 CDD KOW_RPL26 52 105 IPR041988 GO:0003723
Prci5g0295 146 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 142 IPR005756 GO:0003735|GO:0006412|GO:0015934
Prci5g0295 146 FunFam 60S ribosomal protein L26 1 144 - -
Prci5g0295 146 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Prci5g0295 146 SMART kow_9 48 75 IPR005824 -
Prci5g0295 146 NCBIfam 50S ribosomal protein L24 8 122 IPR005756 GO:0003735|GO:0006412|GO:0015934
Prci5g0295 146 Hamap 50S ribosomal protein L24 [rplX]. 9 121 IPR005756 GO:0003735|GO:0006412|GO:0015934
Prci5g0295 146 Gene3D - 1 144 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0295 Prci-Chr5 4140680 4141394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0295 1 146 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 89.726 1.71e-95 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0295 K02898 - tcc:18599319 259.225