Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0292 ATGGGAGAAGAGTACGGTAGGGTAGTGGCAGTGAGAGAGTTCGACCCCAATAAAGACAGAGATAGAGTGGAAGCAGTAGAAAGAATATGTGAAGTTGGACCCAGTGGAAAGCTTTCCCTCTTCACCGACCTCCTCGGCGACCCAATTTGCAGGGTCCGCCACTCACCTGCGTTCCGCATGCTGGTGGCTGAGATAGGCCAAGAGATCGTCGGAATGATAAGGGGTTGCATCAAAACCGTCACATGCGGGAAGAAGCTCTCCAGAAATGGAAACAACAGTCATTTCATTGAACCCGTACCTGTATACACCAAACTCGCCTACATCTTAGGCCTTCGCGTCTCGCCTTCTTACCGGAGAATGGGAATAGGGTTGAAGCTGGTGAATACAATGGAGGAATGGTTCAGAGACAATGGAGCTGAATACTCGTACATAGCAACAGAAAAGGACAATTTGGCGTCCTTGATGCTCTTCACCAACAAATGCGGATACTCCAAGTTCCGTACACCGTCCATCCTCGTCAACCCCGTTTTCGCTCATCGGATCAGTCTCTCTCAGAAAATCACTATCATCCAGCTCGACCCCTCCGATGCCGAGCGCCTCTATCGTCGCTGCTTCGCCACCACTGAGTTCTTCCCGCGCGACATTCGCTCCATCCTCAACAACAAACTCACCCTCGGCACCTTCATCGCCGTCCCAAGCGGGTCTTTTAGTCCAGACACTTGGCCCGGGTCGGACTTATTCCTCTCGGACCCACCCGAATCATGGGCGGTTATCAGCGTCTGGAACTGTAAGGAAGTGTTCACGCTGGAGGTCCGGGGCGCGTCGCTCGTGAAGCGCACTCTTGCCAAAATGACGCGGATTGTGGACCGGGCATTGCCGTTTCTGCAGCTGCCATCGATTCCGAATTTTTTCAGGCCGTTCGGGTTTCACTTAATGTACGGATTAGGAGGGGAAGGACCTGAGGCGGCGAAGATGGTGAAGGCTTTGTGCGGGCACGCGCACAACCTCGCGAAACAGCGTGGGTGTGGAGCGGTGGTGACGGAGGTTTCGTGCTGCGAACCATTGAAGTTAGGGATTCCGCACTGGAAGATGCTATCATGCGCCGAGGATTTATGGTGTATCAAGAGGCTCGGGGAAGACTATAGTGACGGCTCTGTCGGCGACTGGACAAAATCTTATCCTGGATTGTCCATTTTTGTTGATCCCAGAGAATTCTAA 1218 0.5287 MGEEYGRVVAVREFDPNKDRDRVEAVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFRMLVAEIGQEIVGMIRGCIKTVTCGKKLSRNGNNSHFIEPVPVYTKLAYILGLRVSPSYRRMGIGLKLVNTMEEWFRDNGAEYSYIATEKDNLASLMLFTNKCGYSKFRTPSILVNPVFAHRISLSQKITIIQLDPSDAERLYRRCFATTEFFPRDIRSILNNKLTLGTFIAVPSGSFSPDTWPGSDLFLSDPPESWAVISVWNCKEVFTLEVRGASLVKRTLAKMTRIVDRALPFLQLPSIPNFFRPFGFHLMYGLGGEGPEAAKMVKALCGHAHNLAKQRGCGAVVTEVSCCEPLKLGIPHWKMLSCAEDLWCIKRLGEDYSDGSVGDWTKSYPGLSIFVDPREF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0292 405 Pfam Acetyltransferase (GNAT) family 56 163 IPR000182 GO:0016747
Prci5g0292 405 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 405 - -
Prci5g0292 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 50 164 IPR016181 -
Prci5g0292 405 CDD NAT_SF 60 141 - -
Prci5g0292 405 FunFam Probable N-acetyltransferase HLS1-like 18 170 - -
Prci5g0292 405 Gene3D - 44 169 - -
Prci5g0292 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 188 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0292 Prci-Chr5 4088776 4090900 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Prci5g0292 Acetyltransf_1 5.9e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0292 - - rcu:8283352 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0586 10 3846905 3849252 Prci5g0292 5 4088776 4090900 CCT
Prci5g0292 5 4088776 4090900 Prci5g0292 5 4088776 4090900 ECH