Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0290 ATGTGTCCCCGGCAACAAGAGATTTGTGGGATCGTCTTTTCGACGAAGGCTATAAAGCAGATGTTGGCATTAATACTCGTAACGGTGCGAATGGGTTCTCCAGTTTTGAGAGGCATGCTAAAGCAAGCAAGTCGTCGTTATGGTCGGCGATCTATTTCCATTCTCGGGGTTCCACATGACGCAGTCCGAGTTTTCATTCGATTCTTGTATTCTTCGTGCTATGAGAAAGAAGAAATGGAAGAACTGGTCTTGCCTTTATTGGTGCTGTCACATGCATTTGTTGTCCCTCACTTGAAGCGTGAATGTGAAGAAAAGCTAGAGATGAGTTTGCTCACTATAGACAACGTAGTTGACGTATTTCAGCTTTCATTGCTATGTGATGCTCCCCGGCTGAGCCTAATTTGTTACCGAATGATCTCAAAGAATCTCAAACCTGTTTCAGAGTCTGAAGGTTGGGAAGCAATGAAGCAGAGTCACCCATTTCTGGAATCCGAACTTCTCGAATACATAACCATGGAAGAGAATAGAAAGAAGATGAGGAAGAGGAAGAGTGAAGAAAGGAAGATCCATATAGAACTGTACGAGGCAATGGAAGCACTGGTTCACATCTGTAGAGATGGGTGTCGAACTATTGGTCCACGCGATAAAGATTTAAAAACGAACGACGCTCCTTGTGGTTATGCAGCCTGCAAGGGGATAGAATTGCTTATTCGTCATTTTGTTGCCTGTAAATTGAGGGTCCCACGTGGTTGCATTCATTGTAAGAGAATGTGGCAACTATTTGAGTTACATTCTCGATTATGTGCTGATCCACATATCTGTAAAGTTCCTTTATGCAGGAGTTTCAAGCAAAAAATATCAAATCAAAGAAAGAGAGATGAGATGAAGTGGAAAATATTGGTTCAGAAGATTTTGAGAACAAAGGGAATTGCTGTGGCACCAATTTTTCAACAGCAATAG 960 0.4208 MCPRQQEICGIVFSTKAIKQMLALILVTVRMGSPVLRGMLKQASRRYGRRSISILGVPHDAVRVFIRFLYSSCYEKEEMEELVLPLLVLSHAFVVPHLKRECEEKLEMSLLTIDNVVDVFQLSLLCDAPRLSLICYRMISKNLKPVSESEGWEAMKQSHPFLESELLEYITMEENRKKMRKRKSEERKIHIELYEAMEALVHICRDGCRTIGPRDKDLKTNDAPCGYAACKGIELLIRHFVACKLRVPRGCIHCKRMWQLFELHSRLCADPHICKVPLCRSFKQKISNQRKRDEMKWKILVQKILRTKGIAVAPIFQQQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0290 319 FunFam BTB/POZ and TAZ domain-containing protein 2 184 309 - -
Prci5g0290 319 SUPERFAMILY POZ domain 31 106 IPR011333 -
Prci5g0290 319 Gene3D TAZ domain 183 308 IPR035898 -
Prci5g0290 319 SMART BTB_4 7 110 IPR000210 GO:0005515
Prci5g0290 319 Pfam TAZ zinc finger 194 279 IPR000197 -
Prci5g0290 319 FunFam BTB/POZ and TAZ domain-containing protein 2 112 182 - -
Prci5g0290 319 SUPERFAMILY TAZ domain 187 287 IPR035898 -
Prci5g0290 319 Pfam BTB/POZ domain 29 108 IPR000210 GO:0005515
Prci5g0290 319 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 29 313 IPR044513 -
Prci5g0290 319 Gene3D - 112 182 - -
Prci5g0290 319 Gene3D Potassium Channel Kv1.1; Chain A 5 111 IPR011333 -
Prci5g0290 319 SMART TAZ_2 187 280 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0290 Prci-Chr5 4052805 4055077 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Prci5g0290 zf-TAZ 4.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0290 - - qsa:O6P43_033903 421.779