Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0289 ATGGAGGTCAATAATTCAATTCCAGTACCGCCACCCCCTTTGCCTAGGTCGGCATTAACCAGCTGCACGAGCCAGAAAAAGTTTGTGAACAATTTAACGCCAAGGAAGTGCAGCTATGTGTCCCCGGCAACAAGAGATTTGTGGGATCGTCTTTTCGACGAAGGCTATAAAGCAGATGTTGGCATTAATACTCGTAACGGTGGTATTATTTTTGCTCATTCTCACATTCTTCGAATGGGTTCTCCAGTTTTGAGAGGCATGCTAAAGCAAGCAAGTCGTCGTTATGGTCGGCGATCTATTTCCATTCTCGGGGTTCCACATGACGCAGTCCGAGTTTTCATTCGATTCTTGTATTCTTCGTGCTATGAGAAAGAAGAAATGGAAGAACTGGTCTTGCCTTTATTGGTGCTGTCACATGCATTTGTTGTCCCTCACTTGAAGCGTGAATGTGAAGAAAAGCTAGAGATGAGTTTGCTCACTATAGACAACGTAGTTGACGTATTTCAGCTTTCATTGCTATGTGATGCTCCCCGGCTGAGCCTAATTTGTTACCGAATGATCTCAAAGAATCTCAAACCTGTTTCAGAGTCTGAAGGTTGGGAAGCAATGAAGCAGAGTCACCCATTTCTGGAATCCGAACTTCTCGAATACATAACCATGGAAGAGAATAGAAAGAAGATGAGGAAGAGGAAGAGTGAAGAAAGGAAGATCCATATAGAACTGTACGAGGCAATGGAAGCACTGGTTCACATCTGTAGAGATGGGTGTCGAACTATTGGTCCACGCGATAAAGATTTAAAAACGAACGACGCTCCTTGTGGTTATGCAGCCTGCAAGGGGATAGAATTGCTTATTCGTCATTTTGTTGCCTGTAAATTGAGGGTCCCACGTGGTTGCATTCATTGTAAGAGAATGTGGCAACTATTTGAGTTACATTCTCGATTATGTGCTGATCCACATATCTGTAAAGTTCCTTTATGCAGGAGTTTCAAGCAAAAAATATCAAATCAAAGAAAGAGAGATGAGATGAAGTGGAAAATATTGGTTCAGAAGATTTTGAGAACAAAGGGAATTGCTGTGGCACCAATTTTTCAACAGCAATAG 1104 0.423 MEVNNSIPVPPPPLPRSALTSCTSQKKFVNNLTPRKCSYVSPATRDLWDRLFDEGYKADVGINTRNGGIIFAHSHILRMGSPVLRGMLKQASRRYGRRSISILGVPHDAVRVFIRFLYSSCYEKEEMEELVLPLLVLSHAFVVPHLKRECEEKLEMSLLTIDNVVDVFQLSLLCDAPRLSLICYRMISKNLKPVSESEGWEAMKQSHPFLESELLEYITMEENRKKMRKRKSEERKIHIELYEAMEALVHICRDGCRTIGPRDKDLKTNDAPCGYAACKGIELLIRHFVACKLRVPRGCIHCKRMWQLFELHSRLCADPHICKVPLCRSFKQKISNQRKRDEMKWKILVQKILRTKGIAVAPIFQQQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0289 367 Gene3D - 160 230 - -
Prci5g0289 367 Pfam BTB/POZ domain 50 156 IPR000210 GO:0005515
Prci5g0289 367 FunFam BTB/POZ and TAZ domain-containing protein 2 160 230 - -
Prci5g0289 367 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 24 361 IPR044513 -
Prci5g0289 367 SMART TAZ_2 235 328 IPR000197 -
Prci5g0289 367 FunFam BTB/POZ and TAZ domain-containing protein 2 232 357 - -
Prci5g0289 367 ProSiteProfiles BTB domain profile. 58 126 IPR000210 GO:0005515
Prci5g0289 367 SMART BTB_4 58 158 IPR000210 GO:0005515
Prci5g0289 367 Gene3D Potassium Channel Kv1.1; Chain A 40 159 IPR011333 -
Prci5g0289 367 Pfam TAZ zinc finger 242 327 IPR000197 -
Prci5g0289 367 Gene3D TAZ domain 231 356 IPR035898 -
Prci5g0289 367 SUPERFAMILY POZ domain 40 154 IPR011333 -
Prci5g0289 367 SUPERFAMILY TAZ domain 235 335 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0289 Prci-Chr5 4052337 4055077 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Prci5g0289 BTB 2.1e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0289 - - qsa:O6P43_033903 499.59