Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0288 ATGCTGAGCTGGGAATCCAGAACAATGGCGACCTCTGCCTCCTCGTTTTCTTTCTCCAGCCTTCTGTGCGAAGAAGATGAGGCTAGCATTTTGAAGGTCAGTGATGAGAATTCTGGCAAGGACTGGATGAACCCATGTTCTGTTTTCGAGGATGAAGAGGAATACATTGAGATTTTGTTTAAAAGAGAAATGGGGTTTGTATTCCCACGTGACGATTGCTCAACCAGTGCTGCTAAGTGGCTCAAGAGTGCTCGTGTGGATGCCATTGACTGGATTTTCAACACTGGAGCGAAATTCGGGTTCAAATTTCACACCATTTACTTATCAGTGACTTACTTCGATCGGTTCCTGTCAAGTCGATCCATTGATGAAGGAAAACATTGGGCTGTTCAATTATTATCGATGGGGTGTTTATCTTTGGCAGCAAAAATGGAAGAGCAAAACGTACCAACTCTATCTGAATTCCCAGGAAAAGAGTATTGCTTTGAGAATAAAGTGATTAGGAAAATGGAATTACTAATTTTGGATTCCTTGGGATGGAAAATGGGATCCGTGACTCCTTTTGCATATCTGCAGTACTTGTTCAATAAATTTTCCTTGGAATCAAAACCAGAAGCAATAATCTCAAGCGCTGTTGACCATATCATGGCCATCGTGAAAGGTATTAATTTAATAGATCAACGACCATCTATTATTGCTTCTGCTGCCATATTAGCCGCTTCTGATGCTACATTAACGAGACGCGGTGTGGAACTTTGTGTAAGCTCGATATCCTGGGGATCTCTAGAAAGTGAACATGTGTTTTCCTGCTACAATCTAATGCAGGAAATAGAGAGAAGAAAAGTTAAGACTCCTCCTGACTCAAATTTGTTGTCTACCCCTGCCAGCTTCACAGATGTTCTGGAGAATGCCTCTGTTCTTTCTTCTGGGACTAAGAGAAAACTCACATTTCCAGATAGTGAAACTGAAAGCAGTCCAGGACTAAAGATACATCGGCCATAG 1002 0.4182 MLSWESRTMATSASSFSFSSLLCEEDEASILKVSDENSGKDWMNPCSVFEDEEEYIEILFKREMGFVFPRDDCSTSAAKWLKSARVDAIDWIFNTGAKFGFKFHTIYLSVTYFDRFLSSRSIDEGKHWAVQLLSMGCLSLAAKMEEQNVPTLSEFPGKEYCFENKVIRKMELLILDSLGWKMGSVTPFAYLQYLFNKFSLESKPEAIISSAVDHIMAIVKGINLIDQRPSIIASAAILAASDATLTRRGVELCVSSISWGSLESEHVFSCYNLMQEIERRKVKTPPDSNLLSTPASFTDVLENASVLSSGTKRKLTFPDSETESSPGLKIHRP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0288 333 PANTHER CYCLINS 41 281 IPR039361 -
Prci5g0288 333 SMART Cyclin_C_2 185 310 IPR004367 -
Prci5g0288 333 FunFam Cyclin-D5-1 80 183 - -
Prci5g0288 333 Pfam Cyclin, N-terminal domain 69 182 IPR006671 -
Prci5g0288 333 CDD CYCLIN_AtCycD-like_rpt1 84 180 - -
Prci5g0288 333 SUPERFAMILY Cyclin-like 44 182 IPR036915 -
Prci5g0288 333 Gene3D - 69 183 - -
Prci5g0288 333 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Prci5g0288 333 Gene3D - 184 255 - -
Prci5g0288 333 SMART cyclin_7 90 176 IPR013763 -
Prci5g0288 333 MobiDBLite consensus disorder prediction 312 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0288 Prci-Chr5 4041245 4043271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0288 17 259 Core Cell Cycle Gene Families AT4G37630 35.659 1.48e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0288 K18811 - gmx:100798140 363.999