Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0284 ATGAGTTGCAACGGCTGCCGAGTTCTTCGAAAGGGATGCAGTGAGAACTGTATATTGCGACCTTGCTTGCAGTGGATCGATACCCCTCAAGCCCAGGGTTACGCCACTGTATTCGTTGCTAAATTCTTTGGCCGTGCAGGCCTCATGTCTTTCATTTCTAACGTCCCTCCCAACCAGAGACCTGCTCTGTTTCAGTCCTTGTTGTTTGAGGCGTGTGGGCGAACGGTCAACCCTGTGAACGGAGCCGTCGGCCTTCTATGGACAGGAAACTGGCACGTGTGCCAGGCCGCTGTGGAGACTGTGCTGCGCGGTGGCACGTTGAAGCCCATGCCGGAGCTTCTAGGCCTGGATGCTCCGGTGCCGGCCGCAGCCACGGACGAGGCATCTGAAGCAGAGGTTACGTGCAATGACATGTGGAAGATCCGAGATCCCAACTCGAATTTGCGATGTAATAACAAGGTCTCTCCCGGCGGCAAACTCAGATCGTCCGATGACTCTGCCATGCTCCAAACGACCGATCTGGACCTCCGATTGACGCCGACCGTCCTCCAAAAAGTGCCTGCCTACGGCTGGCAGCCGGAAGTCAGGCGGCCGGGTTCGCCTTCGATGAACTCGGAAGAATCAGTGACGACGGTGACTTGTTTGGAAAGTGGGATCGGGGATCACCATGCTCACGGCGGAGACCCGAAGCTTCTCAACCTATTCATTTGA 711 0.5626 MSCNGCRVLRKGCSENCILRPCLQWIDTPQAQGYATVFVAKFFGRAGLMSFISNVPPNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLKPMPELLGLDAPVPAAATDEASEAEVTCNDMWKIRDPNSNLRCNNKVSPGGKLRSSDDSAMLQTTDLDLRLTPTVLQKVPAYGWQPEVRRPGSPSMNSEESVTTVTCLESGIGDHHAHGGDPKLLNLFI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0284 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 234 - -
Prci5g0284 236 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Prci5g0284 236 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0284 Prci-Chr5 4011898 4013223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0284 1 235 AS2 family AT3G49940 56.202 6.58e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci5g0284 LOB 4.6e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0284 5 4011898 4013223 Prci10g0579 10 3803402 3804801 CCT
Prci10g0579 10 3803402 3804801 Prci5g0284 5 4011898 4013223 ECH
Prci5g0284 5 4011898 4013223 Prci5g0284 5 4011898 4013223 ECH