Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0283 ATGACGCAGTTCACACCAACGCTACCACCTTTGCACCATGTCACGCCCCTTTCGAACTCAATCAGCAATAACAACAACATTCAAGTTCCTAGGACGACGAATTCATGGCCGAAATTCCAACAATCCAAGGCACTAGTTGGCTTTGGCGATGCTAATTGCATGGAACAGTTGCTTATTCACTGCGCCGACGCCATGGAAGCCAATGACGTCACTCTCGCCCAGCAAATCCTCTGGGTTCTGAACAACATCGCACCTCCCGACGGCGACTCAAATCAGCGTCTCGCGGCCACCTTCTTGAGCGCCCTCACCTCACGCGCCGCCAAATCTGGGAGCTCCAAAATGTTAGCCGCCGTCACAAGCGCCCGCAACACCGGTCTCGCCATTCAAACGCACCGCTTCTCCATCATCGAGCTTGCCAACTTCGTTGATGTCACCCCCTGGCATCGTTTCGGCTTCACAGCAGCTAATTTGGCCATTCTAGAAGCCACGGAAGGTTTCTCCACCATTCACATCGTTGACCTCAGCTCAACACACTGCATGCAGATTCCCACCCTAATTGACGCCATCGCTTCTCGCCATGACGTCCCTCCTCTGATCAAGCTGACGGTAGTGGGTGCTTCTAGAAACATCCCACCTATAATCGACCTTTCCTATGACGAACTGGGTTCAAAGCTGGTCAATTTCGCAAAGTCCAAAAACGTCGTGATGGATTTTAGAGTGATTTCTTCTACTCACGCAGATGGATTCGCTGCTTTGATCCAATATCTTGGCGTGCAGCGTCTCGTGACGGAAGCTCTGGTGATAAACTGTCACATGATGCTTCATTGTATTCCTGACGAAACCCTATCCGCCACTTCCACTTCATCCCTGAGATCACTGTTCCTGAAGGCTTTGCGGAGTTTGAACCCAACGCTTGTCGTTTTGGTGGAGGAGGACGCGGATTTGACACCGATGGATTTGGTGTGCAGGCTGAGGGCTGCGTTTAATTATATGTGGATACCGTACGACACGATGGACACGTTTCTTCAACGAGGAAGCGAGCAAAGGCAATGGTACGAAGCGGATATGTGTTGGAAGATTGAGAACGTGATGGCGCATGAAGGGGTTGAGAGAGTTGAGAGGCTGGAGAGTAAGAGCAGGTGGGAGCAGCGAATGAGAGATGCGGAGTTCCAGGGTATTAGCTTCAGCGACGACGCCGTTTCGGAGGTGAAGGCCATGCTGGACGAGCATGCAGCTGCGTGGGGATTGAAGAAGGAAGAGCAGCATCTTTTGCTAACGTGGAAAGGACATAATGTCGTCTTTGCCTCTGCTTGGTTTCTTGCTTGA 1326 0.5151 MTQFTPTLPPLHHVTPLSNSISNNNNIQVPRTTNSWPKFQQSKALVGFGDANCMEQLLIHCADAMEANDVTLAQQILWVLNNIAPPDGDSNQRLAATFLSALTSRAAKSGSSKMLAAVTSARNTGLAIQTHRFSIIELANFVDVTPWHRFGFTAANLAILEATEGFSTIHIVDLSSTHCMQIPTLIDAIASRHDVPPLIKLTVVGASRNIPPIIDLSYDELGSKLVNFAKSKNVVMDFRVISSTHADGFAALIQYLGVQRLVTEALVINCHMMLHCIPDETLSATSTSSLRSLFLKALRSLNPTLVVLVEEDADLTPMDLVCRLRAAFNYMWIPYDTMDTFLQRGSEQRQWYEADMCWKIENVMAHEGVERVERLESKSRWEQRMRDAEFQGISFSDDAVSEVKAMLDEHAAAWGLKKEEQHLLLTWKGHNVVFASAWFLA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0283 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 428 IPR005202 -
Prci5g0283 441 ProSiteProfiles GRAS family profile. 45 439 IPR005202 -
Prci5g0283 441 MobiDBLite consensus disorder prediction 1 26 - -
Prci5g0283 441 Pfam GRAS domain family 54 438 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0283 Prci-Chr5 3988847 3990719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0283 38 438 GRAS Transcription Factor Family AT3G49950 60.988 1.20e-177 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci5g0283 GRAS 6.2e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0283 - - pcin:129296651 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0283 5 3988847 3990719 Prci5g0283 5 3988847 3990719 ECH