Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0256 ATGTCTACCCAGGATCAACCACTCCTTGGCTTGCGCGAGGAGGAGGCGCTGGAAACTGCCTATGATTCATCGGAGAAGATCGTGGTTGTCGGGGTTGATGACTCCGACGCCGATAATTTTGGTAAAGCGCCGCCGTTCTCATGGAAGAAGCTCTGGCTCTTCACTGGCCCTGGGTTTCTCATGAGCATCGCGTTTCTCGATCCTGGGAATTTGGAGGGTGATCTTCAGGCTGGTGCTATTGCTGGCTACTCACTTCTATGGCTCCTCATGTGGGCGACGGCTATGGGGCTTCTCGTTCAGCTCTTGTCTGCTCGCCTCGGCGTCGCCACCGGAAGGCATTTGGCTGAGCTCTGCAGGGAGGAGTACCCCACGTGGGCCAGGATGGTGCTGTGGGTTATGGCAGAGTTAGCTCTAATTGGGGCCGACATTCAAGAGGTCATTGGAAGCGCTATTGCTATTAGGATTCTAAGTAACGGATTTGTGCCGCTTTGGGCTGGGGTCGTCATCACAGCTTTTGATTGTTTTATTTTTCTATTTCTGGAGAACTATGGTGTGAGGAAACTGGAAGCACTTTTTGCGGTTCTCATTGGTATAATGGCACTTTCATTTGCGTGGATGTTTGGCGAAGCAAAGCCTGATGGCTTAGATATTCTTCTCGGCCTTTTGGTTCCAAAACTTAGCTCGAAAACGATACAGCAGGCTGTTGCTGTTGTAGGTTGCATTATCATGCCTCACAATGTGTTCTTGCACTCTGCACTTGTTCAATCGAGACAGATTGACTTAACCAAGAAAGGACGAGTTCAAGAAGCTCTTAATTATTATTCTATTGAATCCGCTGTTGCACTTGCGGTCTCTTTAGTCATTAACATATTTGTTACAACTGTGTTTGCCAAGGGTTTCTATGGTACTGAGCTAGCAAATAGCATTGGTCTTGAAAATGCGGGGCAGTATCTTCAGCAGAAGTATGGCGGCGGACTTTTCCCGATCTTATATATATGGGGTATTGGGTTATTAGCAGCCGGCCAAAGTAGCACCATTACTGGCACTTATGCCGGACAATTTATCATGGGTGGTTTTCTGAATTTAAGGTTGAAAAAATGGATGAGGGCTTTAATCACGCGAAGTTTTGCTATCATCCCAACCATAATAGTTGCACTTGTCTTTGATACCTCTGAGGACTCATTAGATGTCCTGAACGAATGGCTCAATGTTCTCCAGTCAGTTCAAATCCCTTTTGCTCTTATTCCCTTGCTTTGCTTGGTGTCAAAAGAGCAGTTGATGGGGACTTTCAGGATTGGCGTTGTCCTCAAGATTATTTCCTGGTCTGTGGCTGCTTTAGTGATAATCATTAACGGCTATCTGTTGGTGGAATTCTTCTCCTCTGAAGTGAATGGGCCAGTGATTGGCACCATAGTGTTTGCATTTACAGTCCTGTATGTTGCATTCATAATCTACCTTGCTTCACGAATGATCACCTTTTTGCCGTGGCAAAGACTTTCGCAAACCAAGACAAACACTAACGCAGAACTGACGAGTTGA 1539 0.4639 MSTQDQPLLGLREEEALETAYDSSEKIVVVGVDDSDADNFGKAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCREEYPTWARMVLWVMAELALIGADIQEVIGSAIAIRILSNGFVPLWAGVVITAFDCFIFLFLENYGVRKLEALFAVLIGIMALSFAWMFGEAKPDGLDILLGLLVPKLSSKTIQQAVAVVGCIIMPHNVFLHSALVQSRQIDLTKKGRVQEALNYYSIESAVALAVSLVINIFVTTVFAKGFYGTELANSIGLENAGQYLQQKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTIIVALVFDTSEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQLMGTFRIGVVLKIISWSVAALVIIINGYLLVEFFSSEVNGPVIGTIVFAFTVLYVAFIIYLASRMITFLPWQRLSQTKTNTNAELTS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0256 512 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 43 488 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 NCBIfam Nramp family divalent metal transporter 56 426 - -
Prci5g0256 512 Hamap Divalent metal cation transporter MntH [mntH]. 37 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 Pfam Natural resistance-associated macrophage protein 72 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 341 360 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 234 257 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 369 386 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 185 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Prci5g0256 512 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0256 Prci-Chr5 3617130 3620329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0256 28 496 Inorganic Solute Cotransporters AT2G23150 79.661 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0256 K21398 - gmx:100789871 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0552 10 3626747 3630334 Prci5g0256 5 3617130 3620329 CCT
Prci5g0256 5 3617130 3620329 Prci5g0256 5 3617130 3620329 ECH