Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0254 ATGACTTTCTGCAAGGAGGAAGAAGAAATGGTGGATGAGGTATCTGTTGCAGTATCAGTATCAATGAACAAAGAAGTAGAAGTTGGATCAGAGGGAACAAGAGAATGGTTGAGTTTAGGACTCAACGGATCTGACAAACCCCAGGACATGGAGGGCGCCGAAATATCAAAACCATTCCAGAATAACAAGGTATTCTCATGCAATTTCTGCATGAGAAAGTTTTATAGTTCACAAGCCCTAGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGGAGAGGCAGAAAGGAACCAATCTCATAGAATGACGATGGTGGCGTCAAGGTCACTGGGAGTGCAGACACACTCATTTGTGCACAAGCCAAGCAGAGAAGCGTCAGGCATGGCGGCTCGATTCTGTGGTGTCAATCATGGGTTTCAAATGCCATATTGGATGCCGTTTATGGTAGAACAAGCTATGGATTTGAGTTGGCCAGGAAGTTTTCGTGTGGATTTGCCAAAACAAGAATCGGATGTAAATAAGCTTGACTTGGATCTTCAGCTCTGA 546 0.4487 MTFCKEEEEMVDEVSVAVSVSMNKEVEVGSEGTREWLSLGLNGSDKPQDMEGAEISKPFQNNKVFSCNFCMRKFYSSQALGGHQNAHKRERGEAERNQSHRMTMVASRSLGVQTHSFVHKPSREASGMAARFCGVNHGFQMPYWMPFMVEQAMDLSWPGSFRVDLPKQESDVNKLDLDLQL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0254 181 Gene3D Classic Zinc Finger 49 125 - -
Prci5g0254 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
Prci5g0254 181 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Prci5g0254 181 PANTHER ZINC FINGER PROTEIN 4-LIKE 5 181 - -
Prci5g0254 181 SUPERFAMILY beta-beta-alpha zinc fingers 61 91 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0254 Prci-Chr5 3565633 3567190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0254 61 172 C2H2 Transcription Factor Family AT1G24625 42.623 4.49e-22 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0254 - - ccaj:109809498 187.963