Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0244 ATGAGCTTCTCCAGTCTTCTTCCCCATTTATGCTGGAGATTTTTCCTACTTGTTTTTCTTCTTACTGTTGCTGTGAATCCATGTCTTGCATTAAACAGAGATGGTCTCTTGTTGATTTCTTTGAAGTACTCTGTTTTGACTGATCCTTTGTTCCAGCTTGGAAGCTGGAACTACTGGGACCAGACTCCTTGTTTGTGGAAAGGAGTTCAATGCGACGTTGTTCCGGATGCAACGAATTCTTCTCAGGATCGTGTGGTTGGTTTGGCTCTTCCGAATTCTCAGCTTCTGGGCTCCATTCCTGACGATCTTGGTTTGATTGAAAATCTTCGAAGTCTCGACCTCTCTAATAATTCTCTCAACGGCTCTCTTCCCACTTCACTTTTCCAGGCTTCAAAGCTCGGGTTTCTTGATTTGTCTAACAACTTGATCTCCGGGGAGATTCCAGATTCCGTAGTTCAGCTCACTAATCTTCAGCTTCTTAACCTCTCTGACAATGCATTGGCGGGAAACCTTCCCACTGGTCTTGGAAAGATGCAGAATCTAACTGTTGTGTCGGTGAAGAATAATTACTTATCAGGTGGTCTTCCTAGTGGGTTCCGAATGACGCAAGTCCTAGATCTGTCTTCGAACTTGTTGAACGGATCTCTTCCTTCGGATTTCGGCGGTGATCGTCTGCGATACTTGAATATATCCTTCAATAAATTTTCCGGGAAAATCACCCCAGAATTCGCAGATAAAATTCCAAGTAACGCTACAGTTGACATCTCCTTCAACAATCTCGCCGGAGAGATTCCAGATTCCTCCGTGTTCACGAACCTCGATTCAAACTCATTTTCTGGGAATCCCGATCTCTGCGGAGGAGAAATCGATAACCCATGTCCCATCTCCTCGCCACCAGCTCCTTCACCAAACGCCACTGCTCCGACATCTCGTCCTGCATTCGCCGTATTTCCAAGAACACTTGATCCTCCTCAATCGGAGTCAGTAAACGGGCCTTTGCGGCAAGAGAGGACAGGACTAAGAACAGGAACAATCATAGGAATCGTTGTAGGGGACATTATAGGCATCGGAATCTTAGCCGTGATATTCCTATACGTGTTCCAATTAAAAAGAAGGAAGAAGTCGGAGGATGCCCTAAACAAAGAAGCCATCAATGGGTCATCATCGCCGTCCTTCGAGTCAAAAGGGTTCAGAAGTTGGTCATGCTTGCATAAAAACACCGAAGAAGAAGAATCATCATCACCATCAGAATCTACAAGTTCTTCTGAAAGCGAAGTGGAAGCACAAAATGGCGCTAAAAATCAGATTCATAGACAAGAAGAATGTTTGCAGAACAAAACAGGGACGTTGGTGACAGTTGATGGGGAAAGAGAGATGGAGCTGGAGACGCTTCTAAAGGCGTCAGCTTTCATCCTGGGCGCCACCGGTTCGAGCATAATGTACAAAGCAGTCCTCGAAGATGGCACCGCGTTAGCGGTCCGGAGAATCGGTGAGATCGGTGTAGGCCGGTTCAAGGACTTCGAGACGCAAGTCCGGGTCGTAGCCAAACTGGTTCATCCAAACCTGGTTCGGGTTCGAGGATTCTATTGGGGAAATGAAGAGAAGCTTATCATCTACGACTTCGTTCCCAATGGCAGCCTCGCCAATTTTCGCTACAGGAAAGTAGGCTCCGCGCCTTGCCATGTGCCATGGGAAATAAGGCTGAAGATTGCTAGAGGGGTAGCACGTGGGCTGGCTTACCTCCACGACAAAAAGCACGTGCATGGAAATCTGAAGCCCAGCAACATTCTCTTGGGCAGTGATATGGAGCCCAAGATTGGAGACTTTGGTCTTGAGAAAATTCTAACAGGAGATACCAGTTACAAAGCTGGAGGCTCGGCCCGTATTTTCGGGAGCAAGAGATCCAGTGCGTCACGGGATAGCTTCCAGGATATTAACGTTGGGCCAAGCCCAAGCCCAAGCCCAAGCTCATTAAGCGGTGTCTCCCCTTACCATGCACCTGAGTCATTCAGGAACCTGAAGCCACACCCAAAGTGGGATGTCTACACGTTTGGGGTCATATTTCTGGAGCTACTGACGGGAAAGACTGTGGTTACTGATGAGACGGGCCAAGGCACTGGGCTTTTGGCGGAGGATAAGAACAGGGCCTTGAGGATGGCTGATGTGGCAATCCGTGCTGACGTGGAGGGTAAAGAGGAGGCCTTGTTGGCTTACTTCAAGCTAGGGTATAGTTGTGTGACCAGCGTCCCTCAGAAAAGGCCGTCAATGAAAGAAGTGTTGTATGCTCTTGATAAAATCACGAGTTCCTTTTCTCCGTCTTCTTCGTCGTGCGCCTATTATTACGGTCACTAA 2352 0.4775 MSFSSLLPHLCWRFFLLVFLLTVAVNPCLALNRDGLLLISLKYSVLTDPLFQLGSWNYWDQTPCLWKGVQCDVVPDATNSSQDRVVGLALPNSQLLGSIPDDLGLIENLRSLDLSNNSLNGSLPTSLFQASKLGFLDLSNNLISGEIPDSVVQLTNLQLLNLSDNALAGNLPTGLGKMQNLTVVSVKNNYLSGGLPSGFRMTQVLDLSSNLLNGSLPSDFGGDRLRYLNISFNKFSGKITPEFADKIPSNATVDISFNNLAGEIPDSSVFTNLDSNSFSGNPDLCGGEIDNPCPISSPPAPSPNATAPTSRPAFAVFPRTLDPPQSESVNGPLRQERTGLRTGTIIGIVVGDIIGIGILAVIFLYVFQLKRRKKSEDALNKEAINGSSSPSFESKGFRSWSCLHKNTEEEESSSPSESTSSSESEVEAQNGAKNQIHRQEECLQNKTGTLVTVDGEREMELETLLKASAFILGATGSSIMYKAVLEDGTALAVRRIGEIGVGRFKDFETQVRVVAKLVHPNLVRVRGFYWGNEEKLIIYDFVPNGSLANFRYRKVGSAPCHVPWEIRLKIARGVARGLAYLHDKKHVHGNLKPSNILLGSDMEPKIGDFGLEKILTGDTSYKAGGSARIFGSKRSSASRDSFQDINVGPSPSPSPSSLSGVSPYHAPESFRNLKPHPKWDVYTFGVIFLELLTGKTVVTDETGQGTGLLAEDKNRALRMADVAIRADVEGKEEALLAYFKLGYSCVTSVPQKRPSMKEVLYALDKITSSFSPSSSSCAYYYGH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0244 783 PRINTS Leucine-rich repeat signature 109 122 - -
Prci5g0244 783 PRINTS Leucine-rich repeat signature 154 167 - -
Prci5g0244 783 SUPERFAMILY L domain-like 42 286 - -
Prci5g0244 783 SMART LRR_typ_2 106 130 IPR003591 -
Prci5g0244 783 SMART LRR_typ_2 154 178 IPR003591 -
Prci5g0244 783 MobiDBLite consensus disorder prediction 406 439 - -
Prci5g0244 783 Pfam Protein kinase domain 472 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0244 783 Gene3D Ribonuclease Inhibitor 201 295 IPR032675 -
Prci5g0244 783 MobiDBLite consensus disorder prediction 413 439 - -
Prci5g0244 783 FunFam Leucine-rich repeat receptor-like protein kinase 31 197 - -
Prci5g0244 783 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Prci5g0244 783 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Prci5g0244 783 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Prci5g0244 783 FunFam Leucine-rich repeat receptor-like protein kinase 200 295 - -
Prci5g0244 783 MobiDBLite consensus disorder prediction 632 663 - -
Prci5g0244 783 MobiDBLite consensus disorder prediction 316 335 - -
Prci5g0244 783 MobiDBLite consensus disorder prediction 289 310 - -
Prci5g0244 783 Gene3D Ribonuclease Inhibitor 31 200 IPR032675 -
Prci5g0244 783 SUPERFAMILY Protein kinase-like (PK-like) 471 768 IPR011009 -
Prci5g0244 783 ProSiteProfiles Protein kinase domain profile. 466 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0244 783 Gene3D Phosphorylase Kinase; domain 1 431 541 - -
Prci5g0244 783 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 88 765 - -
Prci5g0244 783 Gene3D Transferase(Phosphotransferase) domain 1 542 777 - -
Prci5g0244 783 MobiDBLite consensus disorder prediction 632 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0244 Prci-Chr5 3329005 3332938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0244 17 783 Receptor kinase-like Gene Family AT4G37250 57.323 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci5g0244 Pkinase 2.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0244 - - gmx:100784503 959.518