Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0241 ATGGAGGGTAAGCTGGGAAACTGGCATAACTTCTTACTCAGTCATGATAAAAAGTTTGGGTCCTGTCTGCGTGACCCAGCAAGGAGGTCCCGTGAGACATTGGTTGCATTTCTAAAGACGTTTACAAAGCAGAGCGATTTAAAGATTTTTGATGCCATCATCCGACGCCATTCTAATCAAGACTTATTTAAGCTATACAAAGGAAAATCTGATGGCATCCCTGAGCAGAGGCTTGTCCAAAACACTTTGCAGCACCCATTGTATCCATTGGATTATGCATTTGGAGAAGTTGATGAGGACTGGGTTGTTATAAACCTTAGTAAAAAAAACAGGGTGCTGAAATTTACCAAGATGATTGCTATTGATTGTGAAATGGTTCTCTGTGACGATGGAACTGAAGCAGTAGTAAGTGTCTGTGTGGTTGACCGCAATTTGAAGGTTAAACTAAACAAGCGTGTTCACCCAAACAAAGCAATTGCTGACTACAGAACGGAGATTACTGGTGTCTCTCCTAAAGATCTCGAAGGTGTCACGTGCTCATTGTCTAAGATACAGAAATTCTTGAGAAAGATGTTAGTGGATGGAACAATTTTAGTGGGACATAGTTTGCATAATGATCTGCGTGCTCTGAAGCTAGATTATGTTAGGGTGATTGACACCTCATATATCTTCCAATACCCCGATGATAATACTCACAAGAGACCTTCTTTGAATACTTTATGTAAGGCTGTGCTAGGTTATGAAGTTCGGGAAGCAGGTGCTCCACATAATTGTCGTGATGACGCAACGGCAGCAATGAAACTTGTTCTTGCTAAGATAGAGCATGGTGTTGATTATGCAATTCCCTTGCCTCAACCGCTTGTTGTTGAAAGTGATATGGCTAAGCTTCTTCTTCACAAGATATCATGTCGGGTTACTACTGAAGAGCTGCGTAAAGTTGTTCCTGGAGATTTCAATTTACAGCTGGGGCCACGTAAAGGGGCAATATATTCTGCCTATGCCATCTTCAAAAATCCACAAGAGGCCAATAAGGCCTTTGAAAGTCTCCAGGGCCACCAAGAACAGGATTCAGATCGACGTCCACAGAAACTTGTCGAATTCCAGCTCAATACAGGCAAGAAAGCCAGTATTTATGTTCGGAAAATGGCACCGGATGGCCCCAGTGACTCTAAGAGAGATCTAGAAGCGGCAGAAATTGAAGGGAAAGCGTCAAAGAAAGCAAAGATGGACCCTGAAATTGAAGGGAATACCCCGACCATCTCTAACAAGTGCGAGACCCACTTGAATGAGATTGAAGCATTAAATCAGCGACTGAAAGAAAGTGATTTGGAGATTGAATCGCTGAAGCAACAGTTGAAACAAAAGGAATATGAAATCTCCATACTGAATAAAATGGTGTACTCCTTGAACAAGAAATTAGGGAAATGA 1428 0.4195 MEGKLGNWHNFLLSHDKKFGSCLRDPARRSRETLVAFLKTFTKQSDLKIFDAIIRRHSNQDLFKLYKGKSDGIPEQRLVQNTLQHPLYPLDYAFGEVDEDWVVINLSKKNRVLKFTKMIAIDCEMVLCDDGTEAVVSVCVVDRNLKVKLNKRVHPNKAIADYRTEITGVSPKDLEGVTCSLSKIQKFLRKMLVDGTILVGHSLHNDLRALKLDYVRVIDTSYIFQYPDDNTHKRPSLNTLCKAVLGYEVREAGAPHNCRDDATAAMKLVLAKIEHGVDYAIPLPQPLVVESDMAKLLLHKISCRVTTEELRKVVPGDFNLQLGPRKGAIYSAYAIFKNPQEANKAFESLQGHQEQDSDRRPQKLVEFQLNTGKKASIYVRKMAPDGPSDSKRDLEAAEIEGKASKKAKMDPEIEGNTPTISNKCETHLNEIEALNQRLKESDLEIESLKQQLKQKEYEISILNKMVYSLNKKLGK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0241 475 Gene3D - 114 279 IPR036397 GO:0003676
Prci5g0241 475 SUPERFAMILY Ribonuclease H-like 118 273 IPR012337 -
Prci5g0241 475 FunFam Small RNA degrading nuclease 3 113 286 - -
Prci5g0241 475 Pfam Exonuclease 119 268 IPR013520 -
Prci5g0241 475 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 21 278 IPR047021 GO:0004527
Prci5g0241 475 CDD REX1_like 119 270 IPR034922 -
Prci5g0241 475 Coils Coil 424 465 - -
Prci5g0241 475 MobiDBLite consensus disorder prediction 400 421 - -
Prci5g0241 475 SMART exoiiiendus 117 278 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0241 Prci-Chr5 3288098 3292929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0241 117 268 C2H2 Transcription Factor Family AT2G48100 34.146 1.18e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0241 K14570 - gmx:100785565 556.214