Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0232 ATGCCTCATTCCAAAGCTCTCTTTCCCCTCTTCTTCTTTTACTTCACCATTCTCACCACCGTCGTCTCCGATCATCTTCCGGCCACTTCCTCCAAACTGCTCATCTCCTCCGATGCCGTCTCATTGCTCTCTTTCAAGTCCAAAGCCGACCTCGACAACAGGCTCCTCTACACTCTTCACGAGCGCTTCGATTACTGTCAATGGCAAGGCGTCAAGTGCGCGCAGGGCCGAGTCGTTCGGTTCTTCCTTCAGGGCTCTGGCCTTCGTGGCGTCTTCGCTTCCGACACCCTCACTCGCCTCGACCAGCTTCGAATCCTCTGCCTCCGCAATAACTCCCTCTCCGGTCCCATTCCCGATCTCTCTCCTCTCTTCAACCTCAAGGCTCTTCTTCTCGACTACAATTTCTTCTCCGGTTCGCTGCCTCCCTCGTTTCTTTTGCTTCATCGTCTTCGTACCCTTTCTCTCTCTTATAACAACCTCACCGGTTCAATCCCTGTCGAGTTAGTTAATTTGGACCGTTTAGTAACCCTCCGCCTTGACTCAAACCGCTTTAATGGAACCGTTCCGCCGTTGAACCAGTCCTCCCTCCTTATCTTCAATGTCTCCGGCAATAACCTCACAGGGCCGATTCCGGCGACTCTCACTCTTGCTCGATTCCACATGGCGTCGTTTTCGGGGAACCCAGGTCTATGCGGGGACGTTGTTTCCAAAGCATGTGATCATCCTAGGCCCCGAATCTTTGGTTCTTCCAATGCCACTGGTTACTTGGGGCAAAGCGCTGAATCACAGGGCAACATCGTCGTTTCCTCACTGTCTAGTAAAAAGCACAAGAGTAACAGCCTGATTCTTGGGTTCGCCATTGGTGCATCGATTCTGATTTCGTCTTTTGTAGGGCTTATCGCGTTGGTTATGGTTAGTAAACGGAGTGTTTCGAAAAATTTAGAAAGCCCAAAAACGGCGGCAATGGAAGCTATGGATGCTCCTCCTGGGAAGAGAACAGAGGAAATCGACGGAGCTCATCATAATAGTGAGAATTTGGTGTTCTGTTGTGGGGAGGCGCAATTGTATACGCTGGAGCAATTGATGAGAGGGTCGGCCGAGTTACTGGGTAGGGGTAGCATTGGGACTACGTACAAGGCAGTGGTGGATGGGAGGCACACTTTAACAGTAAAGAGGCTAGATGCTGGTAAGACTGCAGGAACAAATGGGCAAGTGTTTGAGCGGCACATGGAAATGGTGGGTCGGCTTCGGCATCCAAATTTAGTACCGGTTAGAGCTTATTTTCAGGCTGAAGCAGAGAGGCTGGTGATCTTTGATTATCAATCTAATGGCAGCCTCTTCAACCTCATTCACGGTTCAAGATCAGCAAGAGCAAAGCCTCTTCATTGGACATCATGCTTGAAGATAGCTGAAGATGTAGCTCATGGACTTGCATATATACATCAAACATCAAGACTAATTCATGGCAACCTAAAGTCCTCAAACGTCCTTCTTGGAGTGGACTTTGAAGCTCGTGTTACAGACTATAGTTTGTCCCTCCTTACAGACTCTTCAACCATTGATGATCCTGATTCTGCTGCCTGTAAAGCACCTGAAACTCGCAACACTAATCGCCCACCTACCTCTAAGTCTGATGTCTATGCCTTCGGGGTGCTTCTACTGGAGCTACTAACTTCTAAATACCCTTCTCAACATCCTTTCCTTGTGCCCATGGATGTGCAGGATTGGGTCAGAACAATGAGAGACGACTATGGTGCTGAAGATGAGCAGTTAGGAATGCTCACAGAGGTCGCTAGTATTTGCACTGTTATATCACCTGAGCAGAGACCAGCTATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGAAGAGTGTAACGCTTGAAGCATCGATCTGTAGACAACGGCTTCCCTGTTCTTAG 1923 0.4883 MPHSKALFPLFFFYFTILTTVVSDHLPATSSKLLISSDAVSLLSFKSKADLDNRLLYTLHERFDYCQWQGVKCAQGRVVRFFLQGSGLRGVFASDTLTRLDQLRILCLRNNSLSGPIPDLSPLFNLKALLLDYNFFSGSLPPSFLLLHRLRTLSLSYNNLTGSIPVELVNLDRLVTLRLDSNRFNGTVPPLNQSSLLIFNVSGNNLTGPIPATLTLARFHMASFSGNPGLCGDVVSKACDHPRPRIFGSSNATGYLGQSAESQGNIVVSSLSSKKHKSNSLILGFAIGASILISSFVGLIALVMVSKRSVSKNLESPKTAAMEAMDAPPGKRTEEIDGAHHNSENLVFCCGEAQLYTLEQLMRGSAELLGRGSIGTTYKAVVDGRHTLTVKRLDAGKTAGTNGQVFERHMEMVGRLRHPNLVPVRAYFQAEAERLVIFDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQTSRLIHGNLKSSNVLLGVDFEARVTDYSLSLLTDSSTIDDPDSAACKAPETRNTNRPPTSKSDVYAFGVLLLELLTSKYPSQHPFLVPMDVQDWVRTMRDDYGAEDEQLGMLTEVASICTVISPEQRPAMWQVLKMIQEIKKSVTLEASICRQRLPCS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0232 640 Gene3D Ribonuclease Inhibitor 35 192 IPR032675 -
Prci5g0232 640 SUPERFAMILY L domain-like 43 232 - -
Prci5g0232 640 SUPERFAMILY Protein kinase-like (PK-like) 367 626 IPR011009 -
Prci5g0232 640 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Prci5g0232 640 Gene3D Transferase(Phosphotransferase) domain 1 442 635 - -
Prci5g0232 640 Gene3D Ribonuclease Inhibitor 193 242 IPR032675 -
Prci5g0232 640 Pfam Protein kinase domain 367 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0232 640 FunFam Leucine-rich repeat receptor-like protein kinase 149 241 - -
Prci5g0232 640 Gene3D Phosphorylase Kinase; domain 1 343 440 - -
Prci5g0232 640 FunFam Probable inactive receptor kinase At5g67200 37 147 - -
Prci5g0232 640 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 624 IPR046959 -
Prci5g0232 640 ProSiteProfiles Protein kinase domain profile. 363 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0232 Prci-Chr5 3242442 3246234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0232 26 628 Receptor kinase-like Gene Family AT3G50230 52.673 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci5g0232 Pkinase 7.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0232 - - qsa:O6P43_034522 808.52