Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0223 ATGGCGTCGTCGAAGCCTGTGCCTTCCACCTGTGCTAACGCATCAGACTCTCCCATGGGCCAATCGACGAAGAGAGAGCAAGAGACAGGTTATACTCCTAAGGATGTGCAATCGGTTATTGATTCTCTGAAAAAACAAGTCGCTGCTGAGAGGGGTATTTCCATTAAGAAAACAATGGAAGAAAGTAAAGCAAAGTTGGTTGGTGTTACAAACCATCTCTATATGTTATCAATGGAAAGAAACTGCGGCAGTACTGATACACAGAGAAGCCTGGACCTACTGACAAGGAGGCAACAAGATGCAATTGCTATGCACAATGATATTCATGCAAGTGAAGGAGATAAGGAGAGTAATGGCTATCATGAAGATACCCATGCTTCTACAGCTGTTCTTCTTGGTTCTAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCTGAAGTAAAAAGATTACCTCCTTACACTACGTGGATTTTTCTGGACAGAAATCAAAGAATGACTGAGGATCAGTCAGTAGTTGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATAATAGAGGAAAAAGAAGAAAAAGAATTTGTAGAATCAGAAGATTATATACTTCGCATGACTATCAAAAAATTTGGTTTGTCTGATCTTGTTGTGGAATCACTGGCCCGGTGTTTTTCTAGAAACGCTTGTGACATTAAGGCAAGATATGAAGTTTTAAGTTGTGAAAACAATGCTGGAAAGAGTTCTCAAAATGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGACAACCTTTTTTGTCGACGATGTCTTGCTTTTGATTGTAGATTGCATGGATGTTCACAGGATCTCATCTTCCCTGCTGAGAAACAACCTGTGTGGATGCCTCCTGATGCTGAAAATGCACCCTGTGGACCAAATTGTTTTCAATTGGTGCTGAAGTCTGAAAGATTTGCCAAAGTCACGTCTTCTGCCCAGGGTGATGTTGAAGAGAAATGCTCAAGTGGTGCTGGGGTGCAAAAATCATGGAGGAAGAAATTGTGCACTCCATCTGCTAGAAGGCGAATAAAGTGTAGCCGGAGCGAAAGCGCTTCGTCAAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGCCCTGGACAGAATAATGCTTCACCTTCGCAGTCAACTCCTAGAACTAAAGCTGTCGGGAAAACTGGAGTTAGTAAGAGGAACAGTAAGAGAGTGGCAGAACGAGTTCTAGTTTGCATGCAGAAGAGGCAGAAGAGAACAGTTGTGTCTGATTCTGATTCCATTGGTGAAGCTCTTGATCATTCATCAAATGAGATGGTCCCTGACCCCCCAGTCACAAGTAGTGATGAGAACCTGAGGAAAGAAGAGTGTGTAAATGAGAATATATGCAATCAAGAATTCACTGATATTAAATCATGGAAAACTCTTGAAAAAGGGCTTCTAGAGAAAGGGGTGGAAATATTTGGTAGAAACAGCTGTTTTATAGCGAGGAATCTCTTAGCTGGTCTGAAAACATGTTGGGAGGTTTTTCAATATATAAATTGCAATGAGGGAAAGATGCCAGGTCCTATTGGTGATGCTGCAAATTCCCTTCTAGATGGCTACTCTAAGGGTAACAATGAACTAAGACGAAGGTCAAGGTTTTTACGCAGAAGAGGAAGAGTCCGTCGGTTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGTCGCCAATATAACCCGTGTGGCTGCCAATCGGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGCAAGAATCGTTTCCGTGGCTGTCATTGTGCAAAGAGCCAATGCCGAAGTCGACAGTGCCCATGCTTTGCTGCAGATAGGGAATGCGATCCTGATGTTTGTAGGAATTGTTGGGTTGGCTGCGGTGATGGCACTCTTGGGATTCCTAGCCAAAGGGGTGATAATTATGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCTGGATGGGGAGCCTTCTTAAAGAACAGCGTTGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCACATAGGGAAGCGGATAAGCGTGGAAAGATATATGATCGTGAGAATTCATCTTTTCTTTTTAATCTGAATGATCAGTTTGTTCTCGATGCTTATCGGAAAGGTGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCAAATTGCTATGCAAAGGTTATAATGGTTGCTGGGGATCACAGGGTAGATTTTGCCAAGGAACGAATTAATGCCGGGGAGGAACTGTTTTATGATTATCGCTATGAACCAGATAGGGCTCCTGCCTGGGCTCGGAAGCCTGAGGCATCTGGATCAAAGAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTCGCTTAA 2571 0.4271 MASSKPVPSTCANASDSPMGQSTKREQETGYTPKDVQSVIDSLKKQVAAERGISIKKTMEESKAKLVGVTNHLYMLSMERNCGSTDTQRSLDLLTRRQQDAIAMHNDIHASEGDKESNGYHEDTHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEEKEEKEFVESEDYILRMTIKKFGLSDLVVESLARCFSRNACDIKARYEVLSCENNAGKSSQNGNSFLDKDLEAALDSFDNLFCRRCLAFDCRLHGCSQDLIFPAEKQPVWMPPDAENAPCGPNCFQLVLKSERFAKVTSSAQGDVEEKCSSGAGVQKSWRKKLCTPSARRRIKCSRSESASSNAKNISESSDSENGPGQNNASPSQSTPRTKAVGKTGVSKRNSKRVAERVLVCMQKRQKRTVVSDSDSIGEALDHSSNEMVPDPPVTSSDENLRKEECVNENICNQEFTDIKSWKTLEKGLLEKGVEIFGRNSCFIARNLLAGLKTCWEVFQYINCNEGKMPGPIGDAANSLLDGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGXFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0223 857 Pfam CXC domain 646 677 IPR041355 -
Prci5g0223 857 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 28 855 IPR045318 GO:0006338|GO:0042054
Prci5g0223 857 CDD SET_EZH 708 824 - -
Prci5g0223 857 SMART CXC_2 642 679 IPR033467 -
Prci5g0223 857 FunFam Putative histone-lysine N-methyltransferase EZH2 608 825 - -
Prci5g0223 857 Pfam SET domain 719 822 IPR001214 GO:0005515
Prci5g0223 857 MobiDBLite consensus disorder prediction 831 857 - -
Prci5g0223 857 ProSiteProfiles SET domain profile. 708 823 IPR001214 GO:0005515
Prci5g0223 857 Coils Coil 192 212 - -
Prci5g0223 857 ProSiteProfiles CXC domain profile. 594 693 IPR026489 -
Prci5g0223 857 MobiDBLite consensus disorder prediction 831 850 - -
Prci5g0223 857 SUPERFAMILY SET domain 582 828 IPR046341 -
Prci5g0223 857 MobiDBLite consensus disorder prediction 378 419 - -
Prci5g0223 857 Gene3D SET domain 608 825 IPR046341 -
Prci5g0223 857 SMART set_7 708 829 IPR001214 GO:0005515
Prci5g0223 857 MobiDBLite consensus disorder prediction 446 472 - -
Prci5g0223 857 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 16 857 IPR025778 GO:0031519
Prci5g0223 857 MobiDBLite consensus disorder prediction 1 35 - -
Prci5g0223 857 MobiDBLite consensus disorder prediction 376 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0223 Prci-Chr5 3129776 3138787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0223 697 826 C2H2 Transcription Factor Family AT2G23740 27.211 3.15e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci5g0223 SET 3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0223 - K11430 gmx:100809840 1394.79