Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0219 ATGACTTTCGTTAAGGAAGACGTGCCAAAGGCTCAAGCTGCTGGTCAACATAAAGAAGTGAATCACAAGAGTCTCTTACAAAGTGATGCTCTTTACCAGTATATACTGGAAACCAGTGTTTATCCACGAGAACACGAGTGCTTGAAGGAGCTGCGAGACTTAACGTCAAAACACCCATGGAACTTGTTGGCTGTGTCTGCCGACGAAGGTCAGTTTCTGAACTTGTTGCTGAAACTCATCAATGCTAAGAACACCATTGAAATAGGCGTCTTCACTGGTTACTCTCTGCTCGCCACAGCCCTTGCTCTTCCAGAAGATGGAAAGATATTGGCCATGGACGTCAACCGAGCAGATTATGAGTTGGGGTTGCCTGTCATTGAAAAAGCAGGCGTTGCTCACAAGATTGACTTCAGGGAAGGACCTGCTCTTCCTGTTCTGGACCAGTTGCTCACAGATGAAAAGAATAAAGGAGCGTTCGATTTCATTTTTGTGGATGCGGATAAAGACAATTACTTGAACTACCATAAGAGGGCGATTGAACTGGTCAAGGTTGGGGGATTGATCGGCTACGACAACACTCTGTGGAACGGATCTGTTGCGGACCCACCGGAGATGCCTCAATTGGATTACATAAAGTACTATCGTGGTTTTGTGTTGGAGCTGAACAAGGCCTTGTCCCATGACTCGAGCATTGAGATCTGTCAACTTCCTATTGGTGATGGCATTACCCTGTGCCGCCGCATCATCTGA 750 0.4653 MTFVKEDVPKAQAAGQHKEVNHKSLLQSDALYQYILETSVYPREHECLKELRDLTSKHPWNLLAVSADEGQFLNLLLKLINAKNTIEIGVFTGYSLLATALALPEDGKILAMDVNRADYELGLPVIEKAGVAHKIDFREGPALPVLDQLLTDEKNKGAFDFIFVDADKDNYLNYHKRAIELVKVGGLIGYDNTLWNGSVADPPEMPQLDYIKYYRGFVLELNKALSHDSSIEICQLPIGDGITLCRRII 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0219 249 FunFam Caffeoyl-CoA O-methyltransferase 1 17 249 - -
Prci5g0219 249 Pfam O-methyltransferase 37 248 IPR002935 GO:0008171
Prci5g0219 249 Gene3D Vaccinia Virus protein VP39 14 249 IPR029063 -
Prci5g0219 249 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 24 248 IPR002935 GO:0008171
Prci5g0219 249 CDD AdoMet_MTases 86 188 - -
Prci5g0219 249 PANTHER O-METHYLTRANSFERASE-RELATED 20 248 - -
Prci5g0219 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 247 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0219 Prci-Chr5 3111312 3112707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0219 6 248 Monolignol Biosynthesis Gene Families AT4G34050 76.132 1.00e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0219 K00588 - gmx:100799303 409.838