Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0210 ATGTCTTGGGTTCGACGGAACTTCATTGGAAGAGGAAGCTTCTCCACTGTCCACCTAGCAGAACCCACCAGCAGTTCCTCTGAGATTTCTTCTCCTACCGCCGTCAAATCGTCCCAAGTTTTCTGCTGTTCTTTTCTCAAGAACGAGAAACAGGTTCTGGATTGTCTTGGATTTTGCCCACAGATTGTGCAGTGTTTAGGGGATGGGTACAGCTTAGAGAATGGTGTCGAGTACTATAATTTGTTTTTGGAATACGCTGCCGGCTGTAATCTCTCGGACCACATCAAGAATCGGGGTGGTCGATTGCCGGAGTCTGATGTCCGAAGGTGCACGATGTCGATTGTCCAAGGAATCCAGCATATACACGCGAAAGGCTTTGTTCACTGTGACATCAAGCTTCAGAACATTCTTCTGTTCGGCAATGGAGATGTCAAAATTGCCGACTTCGGGCTAGCCAAGAAAACAGGGGAGGAAGAAGAAGAGCAGAGCAGGGAAGAGAAACAGCGCGAGTTTAGGGGGACTCCTCTGTTCATGTCACCGGAATCGGTGAAAGACAACGTGTATGACTCTCCGGCTGATATATGGTCCCTCGGCTGTGCGGTGGTGGAGATGGTGACCGGAAAACCCGCCTGGAATAGCCCGAAAGGATCGGAATTGAATAATATATATTCACTGTTGCTTCGAATTGGGGTGGGAGACGAATTGCCGGAAATTCCCGACAAATTATCAGAAGACGGAAAGGATTTTCTGAGGAAGTGTTTGGTGAAGGATCCTGCGAAGAGATGGACGGCGGAGATGCTTTTGAAGCATCCCTTCATAAAGCAGAGCGACGAAGAATCGTCGCCGAGAAGCCACTTCGATTTTCCAGATTGGGTTTCGAGCCCAAGTACTTTTGCTCCGAATTCGCCGGAATCCGACCAATGGTGTGAATGGAAATTTGATTCGTCATCGTGTGTCGCCAGTTTCTGTTCGCCGGTTGATCGACTCCGACAAATGGTGACGGATGAGCGACCCAATTGGTTGGAATTGGAATCTGAAAATTGGGAGGTTGTTAGGTGA 1059 0.4873 MSWVRRNFIGRGSFSTVHLAEPTSSSSEISSPTAVKSSQVFCCSFLKNEKQVLDCLGFCPQIVQCLGDGYSLENGVEYYNLFLEYAAGCNLSDHIKNRGGRLPESDVRRCTMSIVQGIQHIHAKGFVHCDIKLQNILLFGNGDVKIADFGLAKKTGEEEEEQSREEKQREFRGTPLFMSPESVKDNVYDSPADIWSLGCAVVEMVTGKPAWNSPKGSELNNIYSLLLRIGVGDELPEIPDKLSEDGKDFLRKCLVKDPAKRWTAEMLLKHPFIKQSDEESSPRSHFDFPDWVSSPSTFAPNSPESDQWCEWKFDSSSCVASFCSPVDRLRQMVTDERPNWLELESENWEVVR 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0210 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Prci5g0210 352 ProSiteProfiles Protein kinase domain profile. 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0210 352 SUPERFAMILY Protein kinase-like (PK-like) 3 295 IPR011009 -
Prci5g0210 352 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 309 - -
Prci5g0210 352 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Prci5g0210 352 Gene3D Transferase(Phosphotransferase) domain 1 3 302 - -
Prci5g0210 352 Pfam Protein kinase domain 7 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0210 352 SMART serkin_6 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0210 352 CDD STKc_MAPKKK 2 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0210 Prci-Chr5 3021840 3023402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0210 1 340 MAP Kinase Kinase Kinase AT4G36950 51.852 3.73e-115 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci5g0210 Pkinase 1.9e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0210 - - pcin:129311745 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0456 10 3112244 3120953 Prci5g0210 5 3021840 3023402 CCT
Prci5g0210 5 3021840 3023402 Prci5g0210 5 3021840 3023402 ECH