Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0177 ATGCATCCAGATCTGAAAATGGATGGATCAACTGGTCGTGGTGGTACTGGTGTGGACATGTATCTACCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCACGTTTTGACAGGTCACAAAGTTGCTATTAAGATCCTCAACAAACGTAAGATAAAGAATATGGAAATGGAAGAAAAAGTGAGAAGAGAAATAAAAATTTTAAGATTGTTCATGCATCCTCACATCATAAGACTTTATGAAGTCATAGAAACTCCAGCTGACATATACGTTGTTATGGAGTATGTCAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGCAGATTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCCGAGAATTTGCTGTTGGACTCCAAATGCAATGTCAAGATTGCAGATTTTGGTTTGAGCAACGTAATGGTTGATGGTCACTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATATCTGGAAAATATTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAATCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATCTGATCCCAAGGATGCTTGTGGTTGATCCTATGAAAAGGGTGACCATACCTGAAATTCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCAGATACTTCACAGCAAGCCAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGTTACAGAATGAGGTATGCACTCTTTATTCTTTTGCTGTATATCTGCCACATTCTCTCTTCCTTCCTTCCATGTATTTCAGGGTACCGTGGCATATTATTTGCTATTGGACAACCGGTTCCGTGTTTCGAGTGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTGTAATCGGATGCATCCTAGTGAAGTTGCTGCTCCAGCTGTTGGGAACCGCTTTCCAGGGTACATGGATTATCAAGGAACTGGGTTGA 1233 0.412 MHPDLKMDGSTGRGGTGVDMYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTSQQAKKIDEEILQEVVNMGFDRNQLVESLRNRLQNEVCTLYSFAVYLPHSLFLPSMYFRVPWHIICYWTTGSVFRVAILVLSFKRVWILVVIGCILVKLLLQLLGTAFQGTWIIKELG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0177 410 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 24 281 - -
Prci5g0177 410 ProSiteProfiles Protein kinase domain profile. 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0177 410 Gene3D Transferase(Phosphotransferase) domain 1 17 341 - -
Prci5g0177 410 SMART serkin_6 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0177 410 SUPERFAMILY Protein kinase-like (PK-like) 22 339 IPR011009 -
Prci5g0177 410 Pfam UBA/TS-N domain 299 328 IPR015940 -
Prci5g0177 410 CDD STKc_AMPK_alpha 22 277 - -
Prci5g0177 410 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Prci5g0177 410 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Prci5g0177 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Prci5g0177 410 Pfam Protein kinase domain 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0177 410 FunFam Non-specific serine/threonine protein kinase 16 350 - -
Prci5g0177 410 CDD UBA_SnRK1_plant 299 333 - -
Prci5g0177 410 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 298 327 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0177 Prci-Chr5 2521114 2526473 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0177 25 277 CBL-interacting serine-threonine protein kinases AT4G24400 51.969 2.86e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Prci5g0177 Pkinase 4.9e-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0177 K07198 - zju:107415944 632.484