Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0175 ATGCATCCAGATCTGAAAATGGATGGATCAACTGGTCGTGGTGGTACTGGTGTGGACATGTATCTACCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCACGTTTTGACAGGTCACAAAGTTGCTATTAAGATCCTCAACAAACGTAAGATAAAGAATATGGAAATGGAAGAAAAAGTGAGAAGAGAAATAAAAATTTTAAGATTGTTCATGCATCCTCACATCATAAGACTTTATGAAGTCATAGAAACTCCAGCTGACATATACGTTGTTATGGAGTATGTCAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGCAGATTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCCGAGAATTTGCTGTTGGACTCCAAATGCAATGTCAAGATTGCAGATTTTGGTTTGAGCAACGTAATGGTTGATGGTCACTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATATCTGGAAAATATTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAATCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATCTGATCCCAAGGATGCTTGTGGTTGATCCTATGAAAAGGGTGACCATACCTGAAATTCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCAGATACTTCACAGCAAGCCAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGTTACAGAATGAGGGTACCGTGGCATATTATTTGCTATTGGACAACCGGTTCCGTGTTTCGAGTGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTGTAATCGGATGCATCCTAGTGAAGTTGCTGCTCCAGCTGTTGGGAACCGCTTTCCAGGGTACATGGATTATCAAGGAACTGGGTTGAGGCCACAGTTCCCTGTGGAGAGAAAATGGGCTCTTGGGCTTCAGTCTCGAGCCCATCCGCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGACACTATAACATGAAGTGCCGGTGGGTCGCTAGCATTCTGGGTCATCGTGAAGGAATGGTGAATGATCATAATCATTACTTTGGAGATGATTCTGCTATTGCTGAGAATGACACTGTTTCTAAGTCAAATGTGGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGCCCACAGTTTCTCTTCTTGGATCTTTGTGCTTCTTTCCTCGCACAGCTACGTGTCCTCTAG 1554 0.4247 MHPDLKMDGSTGRGGTGVDMYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTSQQAKKIDEEILQEVVNMGFDRNQLVESLRNRLQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDTGCNRMHPSEVAAPAVGNRFPGYMDYQGTGLRPQFPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVASILGHREGMVNDHNHYFGDDSAIAENDTVSKSNVVKFEMQLYKTREEKYLLDLQRVQGPQFLFLDLCASFLAQLRVL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0175 517 ProSiteProfiles Protein kinase domain profile. 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0175 517 CDD UBA_SnRK1_plant 299 339 - -
Prci5g0175 517 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 468 516 IPR001772 -
Prci5g0175 517 SMART serkin_6 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0175 517 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Prci5g0175 517 FunFam Non-specific serine/threonine protein kinase 401 515 - -
Prci5g0175 517 SMART uba_6 300 337 IPR015940 -
Prci5g0175 517 SUPERFAMILY KA1-like 334 516 IPR028375 -
Prci5g0175 517 FunFam Non-specific serine/threonine protein kinase 16 355 - -
Prci5g0175 517 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 298 338 IPR015940 -
Prci5g0175 517 Pfam Protein kinase domain 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0175 517 CDD STKc_AMPK_alpha 22 277 - -
Prci5g0175 517 Pfam Kinase associated domain 1 474 516 IPR001772 -
Prci5g0175 517 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Prci5g0175 517 SUPERFAMILY Protein kinase-like (PK-like) 22 293 IPR011009 -
Prci5g0175 517 Pfam UBA/TS-N domain 299 335 IPR015940 -
Prci5g0175 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Prci5g0175 517 Gene3D Kinase associated domain 1, KA1 401 515 - -
Prci5g0175 517 PANTHER SERINE/THREONINE KINASE 24 342 - -
Prci5g0175 517 CDD AMPKA_C 395 514 - -
Prci5g0175 517 Gene3D Transferase(Phosphotransferase) domain 1 17 355 - -
Prci5g0175 517 SUPERFAMILY UBA-like 287 336 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0175 Prci-Chr5 2519954 2526467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0175 25 277 CBL-interacting serine-threonine protein kinases AT4G24400 51.969 3.18e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Prci5g0175 Pkinase 9.2e-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0175 K07198 - gmx:100796687 953.355