Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0174 ATGCATCCAGATCTGAAAATGGATGGATCAACTGGTCGTGGTGGTACTGGTGTGGACATGTATCTACCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCACGTTTTGACAGGTCACAAAGTTGCTATTAAGATCCTCAACAAACGTAAGATAAAGAATATGGAAATGGAAGAAAAAGTGAGAAGAGAAATAAAAATTTTAAGATTGTTCATGCATCCTCACATCATAAGACTTTATGAAGTCATAGAAACTCCAGCTGACATATACGTTGTTATGGAGTATGTCAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGCAGATTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGACTTGAAGCCCGAGAATTTGCTGTTGGACTCCAAATGCAATGTCAAGATTGCAGATTTTGGTTTGAGCAACGTAATGGTTGATGGTCACTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATATCTGGAAAATATTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCAAATCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATCTGATCCCAAGGATGCTTGTGGTTGATCCTATGAAAAGGGTGACCATACCTGAAATTCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCAGATACTTCACAGCAAGCCAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGTTACAGAATGAGGGTACCGTGGCATATTATTTGCTATTGGACAACCGGTTCCGTGTTTCGAGTGGCTATCTTGGTGCTGAGTTTCAAGAGAGTATGGATACTGGTTGTAATCGGATGCATCCTAGTGAAGTTGCTGCTCCAGCTGTTGGGAACCGCTTTCCAGGGTACATGGATTATCAAGGAACTGGGTTGAGGCCACAGTTCCCTGTGGAGAGAAAATGGGCTCTTGGGCTTCAGCAGTCTCGAGCCCATCCGCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGTGCTGGAAGAAGATTGGACACTATAACATGAAGTGCCGGTGGGTCGCTAGCATTCTGGGTCATCGTGAAGGAATGGTGAATGATCATAATCATTACTTTGGAGATGATTCTGCTATTGCTGAGAATGACACTGTTTCTAAGTCAAATGTGGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGCCCACAGTTTCTCTTCTTGGATCTTTGTGCTTCTTTCCTCGCACAGCTACGTGTCCTCTAG 1557 0.4252 MHPDLKMDGSTGRGGTGVDMYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTSQQAKKIDEEILQEVVNMGFDRNQLVESLRNRLQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDTGCNRMHPSEVAAPAVGNRFPGYMDYQGTGLRPQFPVERKWALGLQQSRAHPREIMTEVLKALQELNVCWKKIGHYNMKCRWVASILGHREGMVNDHNHYFGDDSAIAENDTVSKSNVVKFEMQLYKTREEKYLLDLQRVQGPQFLFLDLCASFLAQLRVL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0174 518 CDD AMPKA_C 395 515 - -
Prci5g0174 518 ProSiteProfiles Protein kinase domain profile. 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0174 518 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 469 517 IPR001772 -
Prci5g0174 518 CDD UBA_SnRK1_plant 299 339 - -
Prci5g0174 518 SMART serkin_6 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0174 518 Pfam Kinase associated domain 1 475 517 IPR001772 -
Prci5g0174 518 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Prci5g0174 518 SMART uba_6 300 337 IPR015940 -
Prci5g0174 518 FunFam Non-specific serine/threonine protein kinase 16 355 - -
Prci5g0174 518 SUPERFAMILY Protein kinase-like (PK-like) 22 294 IPR011009 -
Prci5g0174 518 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 298 338 IPR015940 -
Prci5g0174 518 Pfam Protein kinase domain 25 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0174 518 CDD STKc_AMPK_alpha 22 277 - -
Prci5g0174 518 FunFam Non-specific serine/threonine protein kinase 401 516 - -
Prci5g0174 518 PANTHER SERINE/THREONINE KINASE 24 342 - -
Prci5g0174 518 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Prci5g0174 518 SUPERFAMILY KA1-like 334 517 IPR028375 -
Prci5g0174 518 Gene3D Kinase associated domain 1, KA1 401 516 - -
Prci5g0174 518 Pfam UBA/TS-N domain 299 335 IPR015940 -
Prci5g0174 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Prci5g0174 518 Gene3D Transferase(Phosphotransferase) domain 1 17 355 - -
Prci5g0174 518 SUPERFAMILY UBA-like 287 336 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0174 Prci-Chr5 2519954 2526469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0174 25 277 CBL-interacting serine-threonine protein kinases AT4G24400 51.969 3.00e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Prci5g0174 Pkinase 9.2e-81 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0174 K07198 - gmx:100796687 948.732