Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0153 ATGTCCTATTACCCCAGAAACTTGATTATTGTGCTCACGATCTTCTTCATCTCCTCAACAAGAGCAGAAAAGTCGAGCAACTCTGGTCGCCGTTGTGGAAATTATTCCGTGCAGTATCCTTTCGGTTTCACGGAGAAGTGCGACTGCAAGATCAGATTGAACTGCAATGGGACGCGCATGGAAATTGGGGGCATGCAGGTGGAGAAAGTAACCTCTAGCAGCATCTTCGTCAATCTTCCTGCAAGATGCAACCGAAGTATGAAATCTATCCTCCCCCTTTTCAGTCCCCACTTCGCTCCCACACGGAACAATAGCCTTCTGGTACAAAATTGTTCTTCTCAGCAGGACAGATGCTTTATACCCACCGCCAGTCTCATGGGCAGTCAATTCAATTTGAAGACTTGCCATCGTGGTAACATCAGTTGCTTTTTGCAAACAAGGGATGATACAGATGTTCTGACAACAGCAGAATTGAATAAAACTACGTGCAAGTTCTTGTTCTCTGGGATTGCTATTGAGCAAGGCAAAGACCCAACGATTGCGCTCCGTCTTCAGATGCTTGAATTGGGGTGGTGGCTTGAAGGCCCACCCCGATGCTCTGACAATGCCATCCCTACCAAAGTTCATCTCGGCGGCAGGAAGACCGGGTACCGATGCCAGTGTCATGAAGGTTACGCCGGAGATGGCTTCAAGAACGGCACTGGTTGCCGGAAAGATTCTCAGTGCAGCGCCTCAACTCTAATGTCTGGTGGATGTGGAAAAGCAATTAAAATCGGTGTTCTTGTCGGAGGGATCATTGCTGTAGCTGTCTTCCTGACTGGTTTGTGTCTTCGATGTTACTTTGCTCGGCGCCATTATGCGTGTTTGACAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGCAACTCTACTGTTCCTTTTTACCCGTACAAAGAAATAGAAAAAGCCACTAACTTTTTCTCTGAGGAACAGAGGTTGGGAACTGGGGCTTTTGGTACAGTATATGCTGGAAAACTACACGATAATGAATGTGTTGCTATAAAAAAAATCAAGTATAAAGACACCAACAGTGTTGACCGAGTTATGAACGAGATCAAGCTTCTTTCGTCTGTGAGTCACCCTAATTTAGTTCGCCTCTTGGGCTGCTGCATAGAGGGTGGTGAGCAGATACTTGTTTACGAGTTTATGCCCAATGGAACACTATCCCAGCATTTGCAAAGAATGAGGGGAACTGGACTTACATGGACAACACGACTCACCATTGCTACTGAAACAGCTAATGCTATTGCTTATCTTCATTCTGCCATTGATCCCCCAATTTATCACAGGGACATAAAATCCAGCAATATACTCTTGGATTACGACTTCAAATCAAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACTGCTCCACAAGGGACTCCAGGCTATGTCGACCCTCAATACCACCAAAACTTCCATCTTTCTGATAAAAGTGATGTTTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACCGCCTTGAAAGTGGTTGATTTTGCACGACCTCATAGTGAGGTTAATTTGGCTGCACTCGCTGTTGATAGAATAAGAAGAGGTTCTGTGGATGAGATTATAGATCCTTTTCTGGAGCCTCACAGGGATGCTTGGACACTCTACTCTGTTCACAAGGTTGCTGAGCTCGCATTTAGATGCCTTGCTTATCACAGCGACATGAGGCCTACCATGATGGAGGTAGCAGAGGAGCTAGAACACATCAAACGCAGTGGACGGGCATCAATGGAAGAAACACTATGCACGGCTTTGTCCATTGGTTCCTCATGTTCATCACCTCGCATTGGAAGTGAGAAGTCAATGGATCGTATTACTCTTAAAAAAGCTGAACGAGGGAGCAAGAGATCAATTAGTCAACAGAAGATGGATAAAATTCAGCATTCTACGGAAGCAGTGAAGGATAGCTCTCCTGTATCAGTGCATGATCCTTGGTCAAGCGGACAAAGCTCACCCTCAGCAAACAGCTTGCTGGGAAACGTAGTTCAGTGA 2079 0.4526 MSYYPRNLIIVLTIFFISSTRAEKSSNSGRRCGNYSVQYPFGFTEKCDCKIRLNCNGTRMEIGGMQVEKVTSSSIFVNLPARCNRSMKSILPLFSPHFAPTRNNSLLVQNCSSQQDRCFIPTASLMGSQFNLKTCHRGNISCFLQTRDDTDVLTTAELNKTTCKFLFSGIAIEQGKDPTIALRLQMLELGWWLEGPPRCSDNAIPTKVHLGGRKTGYRCQCHEGYAGDGFKNGTGCRKDSQCSASTLMSGGCGKAIKIGVLVGGIIAVAVFLTGLCLRCYFARRHYACLTKQMTVKRLLREAAGNSTVPFYPYKEIEKATNFFSEEQRLGTGAFGTVYAGKLHDNECVAIKKIKYKDTNSVDRVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRMRGTGLTWTTRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYDFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHSEVNLAALAVDRIRRGSVDEIIDPFLEPHRDAWTLYSVHKVAELAFRCLAYHSDMRPTMMEVAEELEHIKRSGRASMEETLCTALSIGSSCSSPRIGSEKSMDRITLKKAERGSKRSISQQKMDKIQHSTEAVKDSSPVSVHDPWSSGQSSPSANSLLGNVVQ 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0153 692 Gene3D Transferase(Phosphotransferase) domain 1 399 619 - -
Prci5g0153 692 Pfam Protein tyrosine and serine/threonine kinase 326 595 IPR001245 GO:0004672|GO:0006468
Prci5g0153 692 SMART serkin_6 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0153 692 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 678 IPR044652 GO:0004672
Prci5g0153 692 FunFam Wall-associated receptor kinase-like 20 399 608 - -
Prci5g0153 692 MobiDBLite consensus disorder prediction 661 692 - -
Prci5g0153 692 ProSiteProfiles Protein kinase domain profile. 323 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0153 692 MobiDBLite consensus disorder prediction 638 692 - -
Prci5g0153 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Prci5g0153 692 SUPERFAMILY Protein kinase-like (PK-like) 305 597 IPR011009 -
Prci5g0153 692 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524
Prci5g0153 692 MobiDBLite consensus disorder prediction 638 660 - -
Prci5g0153 692 Gene3D Phosphorylase Kinase; domain 1 285 398 - -
Prci5g0153 692 FunFam Wall-associated receptor kinase-like 14 290 398 - -
Prci5g0153 692 CDD STKc_IRAK 329 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0153 Prci-Chr5 2334731 2340524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0153 1 690 Receptor kinase-like Gene Family AT2G23450 52.908 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci5g0153 PK_Tyr_Ser-Thr 9.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0153 - - pcin:129311319 1369.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0380 10 2566556 2570504 Prci5g0153 5 2334731 2340524 CCT