Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0152 ATGGTGAGTTACTTCTCCAACTGCTACAGCCATTTATTTCAACAATTGCAGGATGCTCGAAGATGGCTGCTCAACGGCTTCAGCCACGAGGTTTCAGAAGGTGATGGTAATGCTGTTCGCTCAAAACCCAATACAGACCAATACAATTTCCATCAAGAGATGTCCTATTACCCCAGAAACTTGATTATTGTGCTCACGATCTTCTTCATCTCCTCAACAAGAGCAGAAAAGTCGAGCAACTCTGGTCGCCGTTGTGGAAATTATTCCGTGCAGTATCCTTTCGGTTTCACGGAGAAGTGCGACTGCAAGATCAGATTGAACTGCAATGGGACGCGCATGGAAATTGGGGGCATGCAGGTGGAGAAAGTAACCTCTAGCAGCATCTTCGTCAATCTTCCTGCAAGATGCAACCGAAGTATGAAATCTATCCTCCCCCTTTTCAGTCCCCACTTCGCTCCCACACGGAACAATAGCCTTCTGGTACAAAATTGTTCTTCTCAGCAGGACAGATGCTTTATACCCACCGCCAGTCTCATGGGCAGTCAATTCAATTTGAAGACTTGCCATCGTGGTAACATCAGTTGCTTTTTGCAAACAAGGGATGATACAGATGTTCTGACAACAGCAGAATTGAATAAAACTACGTGCAAGTTCTTGTTCTCTGGGATTGCTATTGAGCAAGGCAAAGACCCAACGATTGCGCTCCGTCTTCAGATGCTTGAATTGGGGTGGTGGCTTGAAGGCCCACCCCGATGCTCTGACAATGCCATCCCTACCAAAGTTCATCTCGGCGGCAGGAAGACCGGGTACCGATGCCAGTGTCATGAAGGTTACGCCGGAGATGGCTTCAAGAACGGCACTGGTTGCCGGAAAGATTCTCAGTGCAGCGCCTCAACTCTAATGTCTGGTGGATGTGGAAAAGCAATTAAAATCGGTGTTCTTGTCGGAGGGATCATTGCTGTAGCTGTCTTCCTGACTGGTTTGTGTCTTCGATGTTACTTTGCTCGGCGCCATTATGCGTGTTTGACAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGCAACTCTACTGTTCCTTTTTACCCGTACAAAGAAATAGAAAAAGCCACTAACTTTTTCTCTGAGGAACAGAGGTTGGGAACTGGGGCTTTTGGTACAGTATATGCTGGAAAACTACACGATAATGAATGTGTTGCTATAAAAAAAATCAAGTATAAAGACACCAACAGTGTTGACCGAGTTATGAACGAGATCAAGCTTCTTTCGTCTGTGAGTCACCCTAATTTAGTTCGCCTCTTGGGCTGCTGCATAGAGGGTGGTGAGCAGATACTTGTTTACGAGTTTATGCCCAATGGAACACTATCCCAGCATTTGCAAAGAATGAGGGGAACTGGACTTACATGGACAACACGACTCACCATTGCTACTGAAACAGCTAATGCTATTGCTTATCTTCATTCTGCCATTGATCCCCCAATTTATCACAGGGACATAAAATCCAGCAATATACTCTTGGATTACGACTTCAAATCAAAAGTAGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACTGCTCCACAAGGGACTCCAGGCTATGTCGACCCTCAATACCACCAAAACTTCCATCTTTCTGATAAAAGTGATGTTTATAGTTTTGGAGTGGTTTTGGTAGAGATAATAACCGCCTTGAAAGTGGTTGATTTTGCACGACCTCATAGTGAGGTTAATTTGGCTGCACTCGCTGTTGATAGAATAAGAAGAGGTTCTGTGGATGAGATTATAGATCCTTTTCTGGAGCCTCACAGGGATGCTTGGACACTCTACTCTGTTCACAAGGTTGCTGAGCTCGCATTTAGATGCCTTGCTTATCACAGCGACATGAGGCCTACCATGATGGAGGTAGCAGAGGAGCTAGAACACATCAAACGCAGTGGACGGGCATCAATGGAAGAAACACTATGCACGGCTTTGTCCATTGGTTCCTCATGTTCATCACCTCGCATTGGAAGTGAGAAGTCAATGGATCGTATTACTCTTAAAAAAGCTGAACGAGGGAGCAAGAGATCAATTAGTCAACAGAAGATGGATAAAATTCAGCATTCTACGGAAGCAGTGAAGGATAGCTCTCCTGTATCAGTGCATGATCCTTGGTCAAGCGGACAAAGCTCACCCTCAGCAAACAGCTTGCTGGGAAACGTAGTTCAGTGA 2238 0.4522 MVSYFSNCYSHLFQQLQDARRWLLNGFSHEVSEGDGNAVRSKPNTDQYNFHQEMSYYPRNLIIVLTIFFISSTRAEKSSNSGRRCGNYSVQYPFGFTEKCDCKIRLNCNGTRMEIGGMQVEKVTSSSIFVNLPARCNRSMKSILPLFSPHFAPTRNNSLLVQNCSSQQDRCFIPTASLMGSQFNLKTCHRGNISCFLQTRDDTDVLTTAELNKTTCKFLFSGIAIEQGKDPTIALRLQMLELGWWLEGPPRCSDNAIPTKVHLGGRKTGYRCQCHEGYAGDGFKNGTGCRKDSQCSASTLMSGGCGKAIKIGVLVGGIIAVAVFLTGLCLRCYFARRHYACLTKQMTVKRLLREAAGNSTVPFYPYKEIEKATNFFSEEQRLGTGAFGTVYAGKLHDNECVAIKKIKYKDTNSVDRVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRMRGTGLTWTTRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYDFKSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITALKVVDFARPHSEVNLAALAVDRIRRGSVDEIIDPFLEPHRDAWTLYSVHKVAELAFRCLAYHSDMRPTMMEVAEELEHIKRSGRASMEETLCTALSIGSSCSSPRIGSEKSMDRITLKKAERGSKRSISQQKMDKIQHSTEAVKDSSPVSVHDPWSSGQSSPSANSLLGNVVQ 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0152 745 CDD STKc_IRAK 382 651 - -
Prci5g0152 745 SUPERFAMILY Protein kinase-like (PK-like) 358 650 IPR011009 -
Prci5g0152 745 FunFam Wall-associated receptor kinase-like 20 452 661 - -
Prci5g0152 745 Gene3D Transferase(Phosphotransferase) domain 1 452 671 - -
Prci5g0152 745 Gene3D Phosphorylase Kinase; domain 1 338 451 - -
Prci5g0152 745 FunFam Wall-associated receptor kinase-like 14 343 451 - -
Prci5g0152 745 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 64 731 IPR044652 GO:0004672
Prci5g0152 745 MobiDBLite consensus disorder prediction 691 713 - -
Prci5g0152 745 Pfam Protein tyrosine and serine/threonine kinase 379 648 IPR001245 GO:0004672|GO:0006468
Prci5g0152 745 SMART serkin_6 376 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0152 745 ProSiteProfiles Protein kinase domain profile. 376 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0152 745 MobiDBLite consensus disorder prediction 691 745 - -
Prci5g0152 745 MobiDBLite consensus disorder prediction 714 745 - -
Prci5g0152 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Prci5g0152 745 ProSitePatterns Protein kinases ATP-binding region signature. 382 405 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0152 Prci-Chr5 2334731 2340757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0152 39 743 Receptor kinase-like Gene Family AT2G23450 52.222 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci5g0152 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0152 - - pcin:129311319 1481.85