Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0139 ATGGAGATAGCGGAATTAGCCTCCGAACAGGTTTTGAGGAGGGATATCCCATGGGAGACGTACATGGCGACTAAGCTGATCTCAGGCACAAGCCTTCAGCTCTTGAGGCGTTATGATCATCGATCGCGAAGTCACAGAGAACAGTTGCTGGATGATGATGGTCCAGCTTATATTCGTGTATTCGTTCATGTTTTGCGTGATATTTTTAAAGAGGAGACTGTAGAATATGTTTTGGCGTTGGTGGATGAAATGCTTGCAGCAAACCCAAAAAGGGCTAGATTGTTTCATGATAAGTCCCTTGCTGATGTAGATGCCTATGAACCTTTCTTAAGATTGCTCTGGAAAGGGAATTGGTTCATACAGGAAAAAAGTTGTAAGATCCTTGCTTCAATAGTTAGTGTCCGGCCAAAAAATCAAAATGGCTTTGTTACAAATGGAGAAGCGTCAAACTCAAAGAAACCACTTACTACTATTGACGATGTTTTGACAGCATTGGTGAAATGGCTTTGTGAACAGCTGAAGAAGCCTTCTCACCCTAGTCGTGGTGTTCCAACCGCTGTCAATTGCTTGTCAACTTTACTCAAGGAACCCATGGTTAGATCTTCTTTTGTTAGAGCAGATGGGTTCAAGTTGCTTGTACCTTTGATTTCACCAGCATCCACTCAACAATCGATTCAGCTTCTTTATGAAACGTGTCTCTGCATATGGCTATTGTCCTATTATGAGCCTGCAATTGAATACTTGGCTACTTCAAGATCCCTTCCGCGACTTATTGACGTCATAAAGAGTTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGCCTTGACTTTTAAAAACTTGCTGTCAAGAGGAACATTGGGTGCTCAAATGGTTGACCTTCAGCTACCGCAAGTTGTTCAGAATTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTAAATTACCTGGAAGAAGGGCTTAAGGATAACATTAAGAAACTAAGTTCTTTTGATAAGTATAAGCAAGAAGTTCTTTTTGGCAATCTGGACTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGAAAATATTACCAATTTCGAAGAGAATGACTTCCAGATTCTAAAAGTCCTAATAACAATTTTGGACACGTCTGGGGATCCGAGGACTCTGGCTGTTGCTTGCTTTGATCTTTCACAGTTCATAAATTACCATTCTGCTGGGAGGATCATCGTGACGAACCTTAAAGCCAAAGAACGAGTGATGAAACTGATGAATCATGAGAACTCTGAGGTCACTAAAAATGCGCTGCTGTGCATCCAAAGGCTTTTCTTAGGTGCCAAGTTTGCTAGTTTCCTTCAGGCTTAG 1359 0.4165 MEIAELASEQVLRRDIPWETYMATKLISGTSLQLLRRYDHRSRSHREQLLDDDGPAYIRVFVHVLRDIFKEETVEYVLALVDEMLAANPKRARLFHDKSLADVDAYEPFLRLLWKGNWFIQEKSCKILASIVSVRPKNQNGFVTNGEASNSKKPLTTIDDVLTALVKWLCEQLKKPSHPSRGVPTAVNCLSTLLKEPMVRSSFVRADGFKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRSLPRLIDVIKSSTKEKVVRVVALTFKNLLSRGTLGAQMVDLQLPQVVQNLKAQAWSDEDLLEALNYLEEGLKDNIKKLSSFDKYKQEVLFGNLDWSPMHKDPIFWRENITNFEENDFQILKVLITILDTSGDPRTLAVACFDLSQFINYHSAGRIIVTNLKAKERVMKLMNHENSEVTKNALLCIQRLFLGAKFASFLQA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0139 452 SUPERFAMILY ARM repeat 9 442 IPR016024 -
Prci5g0139 452 Gene3D - 3 331 IPR011989 -
Prci5g0139 452 SMART arm_5 241 282 IPR000225 GO:0005515
Prci5g0139 452 SMART arm_5 196 240 IPR000225 GO:0005515
Prci5g0139 452 SMART arm_5 402 442 IPR000225 GO:0005515
Prci5g0139 452 FunFam V-type proton ATPase subunit H 343 444 - -
Prci5g0139 452 Gene3D - 344 444 IPR038497 -
Prci5g0139 452 Pfam V-ATPase subunit H 7 323 IPR004908 GO:0000221|GO:0046961|GO:1902600
Prci5g0139 452 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 4 451 IPR004908 GO:0000221|GO:0046961|GO:1902600
Prci5g0139 452 PIRSF V-ATP_synth_H 1 450 IPR004908 GO:0000221|GO:0046961|GO:1902600
Prci5g0139 452 Pfam V-ATPase subunit H 329 441 IPR011987 GO:0000221|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0139 Prci-Chr5 2125827 2132937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0139 1 452 Primary Pumps ATPases(2) AT3G42050 76.106 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0139 K02144 - gmx:100788723 803.897