Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0117 ATGTCTTCCTCATCCCCTGACACTGCTCCGTCTTCAGATTCTGGTAACAATGACAACAATAGTGATGATTATGGAGATCCATCGCAAAGCCCTCCATCACCTCCACCACCAGATCATCAGACGGCGGATCCTAATGACGATCCATTTGTGAATTCTCCACCACCGCCTGACCAGAACTCTTCGGGTTCCAATAATTCCGACTCTGGTTCGTCGTCGGGTTCCAATTCCGATTCTGGTTCATCGAACAAAGGTTCTTCTGGTGGTAAATCCCCATCTCCATCTTCAGGTCCTTCACCGAACAATGGTAAATCGTCGAATTCTGGTTCATCCTCCTCTGATTCGTCGTCATCGTCAACGCCTAATTTAACACCAAAATCTTCCGGTGGGAACAAGCAGTCGCCTCCTGCACTCCCAGATTCCAGCGAAAAAAGCAGCGGCGACAAAAATGGCGACAGCAGAGCAATCATCGGAGCCGCCGTTGGTGTGGGGTTTCTTCTTCTTATAATGATCGTCGTCTGTGTCATTTGTTGCAGAAAGAAGAAGCGAAAGCATAGGTATTACTATAGCGATGATGGCAAACCCGGCAAATCTGCTAGTGGATATTACAACAGAGGGCAGAACCCGAATAACTGGCACCCAGGTGGGAATGACCATGTTGTGAGGATGCAGCAATCACCGGGCATGGGTACGGGCATGGGTCCGGATAGTGGTGGGTGGGGCCCAGTTCCTCCGCCTCCTCCACCGCACAGCACTGACATGAGTTCCAATTACTCACTGGGGCCACCGCCCCTGCCTCCGCCATCCCCAGGGCTGTCATTAGGGCTGAACTGTGGCACCTTCTCTTTTGAAGACTTGGCTGCTGCAACGGAGGGCTTTGCTGATAAGAATCTGATAGGACAAGGAGGTTTTGGTTACGTGCATAAGGGTGTTTTGCCTAATGGAAAAGAAGTTGCAGTGAAGAGCCTGAAAGCTGGCAGCGGCCAAGGAGAGCGTGAGTTCCAAGCTGAGATTGAAATCATTAGCCGTGTTCATCATCGCCATCTCGTCTCGCTTAATGGCTACTGTATTGCTGGTGGACAACGAATGTTGGTTTATGAATTTGTTCCCAACAATACCCTTGAGCATCACCTTCATGGAAAGGGTCTGCCAACCATGACTTGGCCTGATAGACTGAGAATTGCAGTAGGATCTGCCAAGGGGCTTGCATACCTTCATGAAGACTGTCATCCTCGAATTATCCACCGTGATATAAAATCTGCTAATGTCCTACTTGATGACAGCTTCGAAGCCAAGGTGGCTGATTTCGGATTGGCCAAGTTGACTACTGATAATAACACTCATGTCTCAACTCGAGTCATGGGAACATTCGGGTACTTGGCTCCGGAATATGCGTCAAGTGGAAAATTGACTGAGAAGTCTGACGTGTTCTCTTTCGGAGTGATGTTATTAGAACTTATGACGGGGAAGCGACCGATAGATATCCAAAATATGATGGATGACAGTTTAGTGGACTGGGCTCGACCACTTCTGGCAAGGGGGCTAGAGGATGGCAACTTTGAAGAGCTAGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCTCGCATGGCTGCCTGTGCTTCTGCCAGTATTCGTCATTCTGGCAAGAAACGTCCAAAAATGAGCCAGATTGTAAGAGCACTGGAAGGAGATGTGTCACTGGAAGACTTGAACGATACAAGGGCAGGGCATAGCCATCTTCTGGCATCTTCATCGAGCTCAGACTACGATTCAAGTGCATATCAGGCTGATATGAAGAGGTTCAGACAGATAGCTCTGGCGAGCCAGGAATTTGGGAGCAGTGAATCAAGCGGTGAAATGTCTCAGCTTCACCAGATTCCAAAGCAACACCTTTAG 1905 0.4882 MSSSSPDTAPSSDSGNNDNNSDDYGDPSQSPPSPPPPDHQTADPNDDPFVNSPPPPDQNSSGSNNSDSGSSSGSNSDSGSSNKGSSGGKSPSPSSGPSPNNGKSSNSGSSSSDSSSSSTPNLTPKSSGGNKQSPPALPDSSEKSSGDKNGDSRAIIGAAVGVGFLLLIMIVVCVICCRKKKRKHRYYYSDDGKPGKSASGYYNRGQNPNNWHPGGNDHVVRMQQSPGMGTGMGPDSGGWGPVPPPPPPHSTDMSSNYSLGPPPLPPPSPGLSLGLNCGTFSFEDLAAATEGFADKNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLNGYCIAGGQRMLVYEFVPNNTLEHHLHGKGLPTMTWPDRLRIAVGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELMTGKRPIDIQNMMDDSLVDWARPLLARGLEDGNFEELVDPFLEGNYNNQELSRMAACASASIRHSGKKRPKMSQIVRALEGDVSLEDLNDTRAGHSHLLASSSSSDYDSSAYQADMKRFRQIALASQEFGSSESSGEMSQLHQIPKQHL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0117 634 Gene3D Phosphorylase Kinase; domain 1 272 367 - -
Prci5g0117 634 MobiDBLite consensus disorder prediction 56 143 - -
Prci5g0117 634 FunFam proline-rich receptor-like protein kinase PERK1 270 367 - -
Prci5g0117 634 MobiDBLite consensus disorder prediction 1 149 - -
Prci5g0117 634 ProSiteProfiles Protein kinase domain profile. 292 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0117 634 FunFam Proline-rich receptor-like protein kinase PERK1 368 575 - -
Prci5g0117 634 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Prci5g0117 634 Pfam Protein tyrosine and serine/threonine kinase 296 561 IPR001245 GO:0004672|GO:0006468
Prci5g0117 634 MobiDBLite consensus disorder prediction 28 55 - -
Prci5g0117 634 MobiDBLite consensus disorder prediction 187 265 - -
Prci5g0117 634 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 161 608 IPR047117 -
Prci5g0117 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Prci5g0117 634 SMART serkin_6 292 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci5g0117 634 MobiDBLite consensus disorder prediction 1 27 - -
Prci5g0117 634 MobiDBLite consensus disorder prediction 615 634 - -
Prci5g0117 634 Gene3D Transferase(Phosphotransferase) domain 1 368 580 - -
Prci5g0117 634 SUPERFAMILY Protein kinase-like (PK-like) 269 564 IPR011009 -
Prci5g0117 634 CDD STKc_IRAK 298 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0117 Prci-Chr5 1834567 1838502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0117 127 624 Trihelix Transcription Factor Family AT1G70460 50.495 2.50e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci5g0117 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0117 - - gmx:100777163 620.928