Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0096 ATGTTTGAAGAATCACGCGGCGAGCATGGGGAGTTATGTTGTGGATGGATGCGGAGAGTTCATGCCAAACGGAGAAAAAGACAACACAGAATCTTTGAGATGTGCTGCTTGTGGATGCCACCGGAATTTTCATCGGAAAGAAACCCAAGATTGGTCCCACCAATGATGATGGCCTTCGGCGGAGTCCCGGCGGAGTCCTCCGGCGAAGATCTCCAGGTGTTCCAGTCTAATAGCGGTGGGCAGCCTCCAGTGCAGGCATCACTCTCGAAGACGAAGAGGTTTCGGACCAAGTTTACTCAAGAACAGAAGAAGAGGATGATGGAATATGCTGAGAAGCTTGGGTGGAAGATCCAGAAAAATGATGAACAAGAAGTACGGCAATTCTGTTCTCAGGTCGGAGTCAACAGGCAGGTTTTCAAAGTTTGGATGCACAACAATAAGCAAAGGAAGCAGCAGCAAGTGTAA 465 0.4882 MFEESRGEHGELCCGWMRRVHAKRRKRQHRIFEMCCLWMPPEFSSERNPRLVPPMMMAFGGVPAESSGEDLQVFQSNSGGQPPVQASLSKTKRFRTKFTQEQKKRMMEYAEKLGWKIQKNDEQEVRQFCSQVGVNRQVFKVWMHNNKQRKQQQV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0096 154 FunFam Zinc-finger homeodomain protein 2 79 152 - -
Prci5g0096 154 SUPERFAMILY Homeodomain-like 78 151 IPR009057 -
Prci5g0096 154 NCBIfam homeobox domain, ZF-HD class 92 148 IPR006455 -
Prci5g0096 154 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 14 148 - -
Prci5g0096 154 Gene3D - 77 152 - -
Prci5g0096 154 ProSiteProfiles 'Homeobox' domain profile. 89 153 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0096 Prci-Chr5 1648606 1649601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0096 50 148 ZF-HD Transcription Factor Family AT2G18350 55.340 3.30e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0096 - - pcin:129311881 217.238