Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0095 ATGACAACCACTCAGAACTATGACGATGATGATCACCCCCCAAGGGATTCTACAGAACACCACCATCTTTTTTTTCCTCCTCCGTCGAATCACCTACAAAGCGATTCATATCCAAGCTCAACGATTGTCAAGTACGGAGAATGTTTGAAGAATCACGCGGCGAGCATGGGGAGTTATGTTGTGGATGGATGCGGAGAGTTCATGCCAAACGGAGAAAAAGACAACACAGAATCTTTGAGATGTGCTGCTTGTGGATGCCACCGGAATTTTCATCGGAAAGAAACCCAAGTCCCTTCTCTTCATCAACAACATAACAGATTGGTCCCACCAATGATGATGGCCTTCGGCGGAGTCCCGGCGGAGTCCTCCGGCGAAGATCTCCAGGTGTTCCAGTCTAATAGCGGTGGGCAGCCTCCAGTGCAGGCATCACTCTCGAAGACGAAGAGGTTTCGGACCAAGTTTACTCAAGAACAGAAGAAGAGGATGATGGAATATGCTGAGAAGCTTGGGTGGAAGATCCAGAAAAATGATGAACAAGAAGTACGGCAATTCTGTTCTCAGGTCGGAGTCAACAGGCAGGTTTTCAAAGTTTGGATGCACAACAATAAGCAAAGGAAGCAGCAGCAAGTGTAA 633 0.4755 MTTTQNYDDDDHPPRDSTEHHHLFFPPPSNHLQSDSYPSSTIVKYGECLKNHAASMGSYVVDGCGEFMPNGEKDNTESLRCAACGCHRNFHRKETQVPSLHQQHNRLVPPMMMAFGGVPAESSGEDLQVFQSNSGGQPPVQASLSKTKRFRTKFTQEQKKRMMEYAEKLGWKIQKNDEQEVRQFCSQVGVNRQVFKVWMHNNKQRKQQQV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0095 210 MobiDBLite consensus disorder prediction 1 37 - -
Prci5g0095 210 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 45 94 IPR006456 -
Prci5g0095 210 Pfam ZF-HD protein dimerisation region 43 95 IPR006456 -
Prci5g0095 210 NCBIfam homeobox domain, ZF-HD class 148 204 IPR006455 -
Prci5g0095 210 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 44 94 IPR006456 -
Prci5g0095 210 SUPERFAMILY Homeodomain-like 134 207 IPR009057 -
Prci5g0095 210 MobiDBLite consensus disorder prediction 8 22 - -
Prci5g0095 210 ProSiteProfiles 'Homeobox' domain profile. 145 209 IPR001356 GO:0003677
Prci5g0095 210 Gene3D - 134 208 - -
Prci5g0095 210 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 204 - -
Prci5g0095 210 FunFam Zinc-finger homeodomain protein 2 136 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0095 Prci-Chr5 1648606 1650038 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0095 43 209 ZF-HD Transcription Factor Family AT2G18350 52.486 1.29e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci5g0095 ZF-HD_dimer 4.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0095 - - pcin:129311881 431.795