Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0094 ATGACAACCACTCAGAACTATGACGATGATGATCACCCCCCAAGGGATTCTACAGAACACCACCATCTTTTTTTTCCTCCTCCGTCGAATCACCTACAAAGCGATTCATATCCAAGCTCAACGATTGTCAAGTACGGAGAATGTTTGAAGAATCACGCGGCGAGCATGGGGAGTTATGTTGTGGATGGATGCGGAGAGTTCATGCCAAACGGAGAAAAAGACAACACAGAATCTTTGAGATGTGCTGCTTGTGGATGCCACCGGAATTTTCATCGGAAAGAAACCCAAGGTAAGGCGGAACTGCAACATATTTCTGATTATTACACCTATTATTCCAACAAAAGCAACGATCAACGACATAGAACTGCTTCTCCTTTAGTCCCTTCTCTTCATCAACAACATAACAGATTGGTCCCACCAATGATGATGGCCTTCGGCGGAGTCCCGGCGGAGTCCTCCGGCGAAGATCTCCAGGTGTTCCAGTCTAATAGCGGTGGGCAGCCTCCAGTGCAGGCATCACTCTCGAAGACGAAGAGGTTTCGGACCAAGTTTACTCAAGAACAGAAGAAGAGGATGATGGAATATGCTGAGAAGCTTGGGTGGAAGATCCAGAAAAATGATGAACAAGAAGTACGGCAATTCTGTTCTCAGGTCGGAGTCAACAGGCAGGTTTTCAAAGTTTGGATGCACAACAATAAGCAAAGGAAGCAGCAGCAAGTGTAA 723 0.4633 MTTTQNYDDDDHPPRDSTEHHHLFFPPPSNHLQSDSYPSSTIVKYGECLKNHAASMGSYVVDGCGEFMPNGEKDNTESLRCAACGCHRNFHRKETQGKAELQHISDYYTYYSNKSNDQRHRTASPLVPSLHQQHNRLVPPMMMAFGGVPAESSGEDLQVFQSNSGGQPPVQASLSKTKRFRTKFTQEQKKRMMEYAEKLGWKIQKNDEQEVRQFCSQVGVNRQVFKVWMHNNKQRKQQQV 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0094 240 MobiDBLite consensus disorder prediction 1 37 - -
Prci5g0094 240 FunFam Zinc-finger homeodomain protein 2 166 238 - -
Prci5g0094 240 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 44 94 IPR006456 -
Prci5g0094 240 Gene3D - 164 238 - -
Prci5g0094 240 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 45 94 IPR006456 -
Prci5g0094 240 Pfam ZF-HD protein dimerisation region 43 95 IPR006456 -
Prci5g0094 240 SUPERFAMILY Homeodomain-like 164 237 IPR009057 -
Prci5g0094 240 ProSiteProfiles 'Homeobox' domain profile. 175 239 IPR001356 GO:0003677
Prci5g0094 240 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 21 234 - -
Prci5g0094 240 MobiDBLite consensus disorder prediction 8 22 - -
Prci5g0094 240 NCBIfam homeobox domain, ZF-HD class 178 234 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0094 Prci-Chr5 1648606 1650210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0094 43 239 ZF-HD Transcription Factor Family AT2G18350 48.756 3.33e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci5g0094 ZF-HD_dimer 5.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0094 - - pcin:129311881 509.99