Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0078 ATGGCGCATCACAGGATGCATTCTGCGAGGTTTCGAGAAGAAATCCCACTGCCTTCGAGAATCAAACATCACGGGATTAAAAATGGCACTCTAAGTAGTAGCAGAAAGCAGGATCAAACATTTGAAGAAGAGCATACAAGTCCTTCAATCGGAAAAATCAACGAAATGGTAGCTGAGGCAGAATTTTCTAAGAATTCCCGAAGGCATAGTTCATTAACAACAAGTTCTACAGGGTCGATTCAATCCGCTGCTATTTTCTTATCAAATCGAATCGACAAGAGTGTCCGAAGCATAATGTCATCGTCATCATCATTAACTGCAGTTTCCAGCTCTCCTGGCAGGAGCAGGGAGGATACTGGGGGGAAAATTACAGAGAAGAGGAAGAAGAAGAAAGGAGCGTTGTTTGCTTGTATGGGACAAGATTCATGCAAGAACTCAAGAAAATCACCAGAACGTCCGAGTGTTGATGAAGCGTTTTTCATCGAGAGAGCGTTCGTGGTGGAGAGCTTGCCACAATTCTGGGCAGACAAGTACCAGCCTACTTCACTGAGCGGCTTCCTTTGCCACCAACAAGAAGTTCAACTTCTCCAGGAACTAGTGTTTCTTGACGAACTTCCACACACTTTGCTAAAAGGTCCCTCTGGTTCAGGGAAAAGAGCCTTAGCAATGGCTCTTCTGCGAGAAATATACGGCGAAGAGTGTTGGAAGTTATCCCACAATTTAAGATATTTCAACTTTCAGGAAGGCAGGCCCATGAAATTAAGTGTTCCAATAACGTGCAGCTGTCATCACGTGGAACTAAACGTAAATTTGGAACAGAATGCTAAGTATGCTTTGATGGGTTTAGTAAAGGAAATGAACTGCATCTATGCAATAACACCCGAAAATGCCAACTCTAATATCAAGTCTGATTGTCAAGTGATAGTTCTCTATGGGGTTGACAAGGCAGAACAGGATATCCAGCAGATAATCAAATGGATTGTAGACTGTCACTCCCAAATGTGCAAACTGGTACTCTGCTGCCAAGATGATATTGACATTCCTGAATCTGTGAGGAACCTGTTCAAAGTGATTGAAGTTCATCCACCTAGCACCCTCCAAATTATGGAGGTTCTGTTTCACATAGCAAAGAAGGAGGGCATTCATCTATCCAAGAATTTTGCTGCTATGATTGCTGCAAAATCTAATCAGAATCTCAGACAAGCTATCATGGCTCTTGAGGCATGCAAAGTTTTCAAATATCCTTTTTTGGAAGAACAACCAATTTCAATTGGATGGGAGGTTATTGTAATAGGAATTGCTTCAGAGATCTTATCTGATCCATCAAACTCATGGTACAAAAATTTCAAAATGAAAAGGAGAATTTCTAGCCATCTCTTGCAGCTCCACGTGTGGAGCAAAACTGTAATGGATCAGATAATGGTTTTATTTATTTATTTATTCTTTTGTTGTTTGATCAGCCTAATCTCAGTAAGAGAAAAATTTCAGAAGCTGATCGAGGATTTTGTCCACCCAAAACTAATTCTCCGGAAAATAGTGGAAGAACTTCTGAAAAAAATCGAAGCCAGATTAAAAAGGGAACTCTACTACTGGCATGCTTATTATGACAAAAGACTCCCACCTGGAACTGTAGCTGCAACCAAGTTAACTGAATTTGTGGCCAAGTTTATGGGCATATACAAAAAGAGCTTTATCAGCAGGCAATATGTGTGA 1713 0.4086 MAHHRMHSARFREEIPLPSRIKHHGIKNGTLSSSRKQDQTFEEEHTSPSIGKINEMVAEAEFSKNSRRHSSLTTSSTGSIQSAAIFLSNRIDKSVRSIMSSSSSLTAVSSSPGRSREDTGGKITEKRKKKKGALFACMGQDSCKNSRKSPERPSVDEAFFIERAFVVESLPQFWADKYQPTSLSGFLCHQQEVQLLQELVFLDELPHTLLKGPSGSGKRALAMALLREIYGEECWKLSHNLRYFNFQEGRPMKLSVPITCSCHHVELNVNLEQNAKYALMGLVKEMNCIYAITPENANSNIKSDCQVIVLYGVDKAEQDIQQIIKWIVDCHSQMCKLVLCCQDDIDIPESVRNLFKVIEVHPPSTLQIMEVLFHIAKKEGIHLSKNFAAMIAAKSNQNLRQAIMALEACKVFKYPFLEEQPISIGWEVIVIGIASEILSDPSNSWYKNFKMKRRISSHLLQLHVWSKTVMDQIMVLFIYLFFCCLISLISVREKFQKLIEDFVHPKLILRKIVEELLKKIEARLKRELYYWHAYYDKRLPPGTVAATKLTEFVAKFMGIYKKSFISRQYV 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0078 570 MobiDBLite consensus disorder prediction 1 53 - -
Prci5g0078 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 410 IPR027417 -
Prci5g0078 570 MobiDBLite consensus disorder prediction 7 21 - -
Prci5g0078 570 SUPERFAMILY post-AAA+ oligomerization domain-like 487 561 IPR008921 GO:0003677|GO:0006260
Prci5g0078 570 MobiDBLite consensus disorder prediction 102 130 - -
Prci5g0078 570 FunFam replication factor C subunit 3 364 422 - -
Prci5g0078 570 Gene3D - 365 417 - -
Prci5g0078 570 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 171 548 - -
Prci5g0078 570 MobiDBLite consensus disorder prediction 102 117 - -
Prci5g0078 570 Gene3D - 172 363 IPR027417 -
Prci5g0078 570 Gene3D - 485 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0078 Prci-Chr5 1562062 1565554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0078 173 566 Core DNA Replication Machinery Family AT5G27740 33.249 1.65e-62 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0078 K10756 - tcc:18610901 496.893