Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0070 ATGGCGCAGCTGATCCCAAACCCCTGCTACGTTGTTGAAGTAAGTAATCCCAATGAGATATGGAAAACTGATTATGACATCCTCAACAAACATGCCCCACTTTTGGGTATCCAAATCACCTTCTGCATCTTCATTACCAACCTTTTCCACACCATCCTCAAACCCCTTCATCAGCCTCGTATTGTAGCTCAGATTCTCGCTGGGTTCTTTCTAAGCCTTGTTATTGCTGTAGATGACAATTTAGTGGACATATTTCTGCCTGCTAGAGGAATTCTAAATCTTGAAACATACACAAATTTCGGGATCATGGGCTACGTCTTCCTTAGTGGATTAGAAATGAATTTGGATACCATCTTACAAGTTGGAAAGAACGATGCAGGCATCGCCCTTCTTGGCATGATCATTCCAACGGCAATGGGAATAGGCCTCTTTGCTTTGATACAAAAAGTTTACGAAATGCCTCCAAACTGGAGTTTTCAAGAAGATGACATGTATATGAGAAAAGCTTATTTGTTTTGGTGTTTAGCTCTGCCTATCTCGAGTTTTCCACTGCTTGCTCGGATCCTCACTGATCTCAAGCTTCTTTATACTAAGCTAGGCAAAGCTACCCTAAGAGCAGCCTTGTTTAGCGAGACTTATGGTTGGGTTCTTTTTATAGCATTAATTCCATTTTCTAGAGACGTTGCGGCAGAGGCAATCTTGTCGGTGTTGAGTACAATGATGTTCATCCTTTTTTGCATCTTCGTGCTACGTCCTTTCATAACAAAATACATCGATCAAAACACCCATCCAGATAAGCAGAACAATTCTGCATTGGCATTTCTACTGTTAGGAGCTTTTGTTTGTTCATATGTTACAGATTTCCTCGGAACCCACCCTGCTGTCGGGTCTTTTGTGTATGGACTGATCTTACCAAATGGGAGATTCACCGACTTGGTGATGGGAACACTAGACAACTTTGTTTCTGGAGCCATATCACCTTTCTTCTTCTTTCGCATTGGCTTGAATGTGAACTTGATGGAACTTGCACATCAAAAATATTGGCCCTTGATGGTCGTAGTTATCCTATTGTTATCCATTCCAAAAGTTTTAAGCACTCTAATTGCCACCTTCTTCTTTGAATTGCCCACTCAAGATAGTATTGGCATGGGACTGCTTCTCAACTCCAAAGGGGCCTTGGCACTAATAATACTAAACCTGGCTTTGGACAGAAAGATTTTTTCTGTGGTGCTCTATACAATCATGGTGTTTGCAGTTCTTGTGATGAATATCATGGCACCTCTTTTCATTAACTTCATGTACAAACCAAGAAAAAAATTCGAGAATTTCAAGCTAAGGACTATTGAAATGTTAAAGAATCACGCCGAGCTTCGAATTCTAAGCTGCGTCCACAATATTCACCAAGCTACTTGCATGGCCAACCTCTTAAAAACTTTCAATGCTAACAGAATTTCTCCTCTGCGAGTGTTCGGAGTTCACCTTGTTGAACTCATTGGACGTGCAGTTGTGGCCACTACTCTTTTGGTTGATCAGATGGAGCAACCAACCCATTCTGGATCACCAGATTCCATACAATCACAACCAAAGTTAAAGAGTATTACCAATACCTTCAACACTTTACAAGAGGAAAATAACGCTATTAGAGTCGAGAACTTGCATGCTATGTCTGCTTATGAAACCATTTACGAGGATATACACAACTTAGCAGAGCAAAATCGAACGTCCTTAATTCTCCTTCCTTTTCAAAAACAAAATGGGGTAATAGGCGGTCGAACAGAGGCAACTGACGAAGCCTACAAAGACATAAACCTTAAGGTTATTCAGCATGCGCCATGTTCTGTGGCACTCCTTGTTGACCGTGGTCTCGGATCGATATCTAAGACCAACTTACGCATAGTGATGCTCTTTGTTGGAGGACCTGATGATCGTGAAGCCTTGGCCGTTGCTTGGAGGATGGTTGGGATTGGGAATCTAGGGAACACACTCTCTGTGGTGCGGATTGTTCTAGTTAGTGAAGCTGCAGAAGCTGGTATATCAACCAGGAATGATGATACTCAATGGCCTTCATCAACAAGAGTGGATGATGAGAGGCAACAAGCTTTGGATGAAGAGTATATGGATTCATTTAGATTCAAGGCAGTGTATAACAACGAATCTGTAACATACTCAGAGGAGGAAGTTCATAACGGGGAGGAGTTAATTGCATTGCTACAAGAATTGGACAAAGTAGAGTGTGATCTGTGCATATCTGGACAAGGAAATGGTAGGAACACAATAGTGTTTTCAAGTTTTATGGAATGGTGTGACAATCCAGAACTTGGAGTTATAGGAGACATAGTGGCATCAAACTCTTCGCTTTCTTCACTACTTGTTGTGAAGCAATATGGGCATGAAGAAATGGTGTTTGGGAGACAAAATCAACACACCAGGACTGGTGTGTCTAATGAGGCACATATTGTATAA 2463 0.4149 MAQLIPNPCYVVEVSNPNEIWKTDYDILNKHAPLLGIQITFCIFITNLFHTILKPLHQPRIVAQILAGFFLSLVIAVDDNLVDIFLPARGILNLETYTNFGIMGYVFLSGLEMNLDTILQVGKNDAGIALLGMIIPTAMGIGLFALIQKVYEMPPNWSFQEDDMYMRKAYLFWCLALPISSFPLLARILTDLKLLYTKLGKATLRAALFSETYGWVLFIALIPFSRDVAAEAILSVLSTMMFILFCIFVLRPFITKYIDQNTHPDKQNNSALAFLLLGAFVCSYVTDFLGTHPAVGSFVYGLILPNGRFTDLVMGTLDNFVSGAISPFFFFRIGLNVNLMELAHQKYWPLMVVVILLLSIPKVLSTLIATFFFELPTQDSIGMGLLLNSKGALALIILNLALDRKIFSVVLYTIMVFAVLVMNIMAPLFINFMYKPRKKFENFKLRTIEMLKNHAELRILSCVHNIHQATCMANLLKTFNANRISPLRVFGVHLVELIGRAVVATTLLVDQMEQPTHSGSPDSIQSQPKLKSITNTFNTLQEENNAIRVENLHAMSAYETIYEDIHNLAEQNRTSLILLPFQKQNGVIGGRTEATDEAYKDINLKVIQHAPCSVALLVDRGLGSISKTNLRIVMLFVGGPDDREALAVAWRMVGIGNLGNTLSVVRIVLVSEAAEAGISTRNDDTQWPSSTRVDDERQQALDEEYMDSFRFKAVYNNESVTYSEEEVHNGEELIALLQELDKVECDLCISGQGNGRNTIVFSSFMEWCDNPELGVIGDIVASNSSLSSLLVVKQYGHEEMVFGRQNQHTRTGVSNEAHIV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0070 820 Pfam Sodium/hydrogen exchanger family 43 433 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci5g0070 820 Gene3D - 35 442 IPR038770 -
Prci5g0070 820 PANTHER CATION/H + ANTIPORTER 26 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0070 Prci-Chr5 1494178 1496894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0070 9 795 Antiporter Super Family AT2G13620 34.750 2.91e-151 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0070 - K26731 pcin:129310739 930.243