Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0048 ATGGCTGAGGTTGCTGTATCAATAGTCGTGGAGAAACTTTCGGAACTTCTACTCGAACAAGCAGTGAACGCAGTTTCAGTACTAGATGGTGTGCGCAACGAAGTAGAGAGGCTGAAGAATGAGTTGCGATGGATGCAATGCTTTCTGAGGGACGCCGATGCTAAACAAGAAGAAAACCAACTGGTTCGCATGTGGGTTTCCGATATTAGAGATATTGCTTTTGAAGCTGAAGAGCTGATAGAGATTTATGTTTACAAGGTGGCGTGTCAAAGCAGATGGGATAGAGTCTTCAGATCCTTCCATCTCTACGAGGTCTCCAGAAAAATCGGGAAAATTCGATCGAGGATACATGATGTATCTGAAAAGCGAGAAACCTACGGAGTTGTCAGCGAGATACAGAGGCAAAATATTACAAGTGAAAGGTTGAGGCACTGGAGACAGCCATGGCCCTACGCTGAAGAGGAGTGCATAATTGAGCTTGAAGATGACATGGAATTTCTGCTCGATCAACTGCTTACAGGGGACGCTGGGAGGGTGGTTTCTATAGTTGGTATGGGGGGTTTGGGCAAAACCACCTTGGCTAAGAAATTGTATAATCACAGCAAAGTTCATAGCCATTTTGATTGTAGAGCTTGGGTTTACGTGTCCAGAGAGTACAGAAGAAGAGACATTTTGCTAGGAATTCTCAAGGATGCGGATGCTCTGGGTAGAAATGAAATTGACAGATCAGAGAGATTGAGGGAGGAAGACATGGTGAACCGGCTGCATACTATCTTGGATGATAAGAGGTATTTGGTAGTTCTTGATGATATTTGGAGCATGGAGGTCTGGGATAGCCTAGAATCTGCATTTCCCAGGGGAAAGATGGGTAGTAAAATTCTGTTTACGACTAGAAACATGGAAATAGGTAAGCATGCTGGTGCTGGTGGCAACCCTCATAAAATACGAACGCTGACGGAGGACGAGAGTTTGAAATTGCTCAGCAACAAAGCATTCCCTGGAATGAATAGCATCCCCACGGAATTGGAAAACCTTGCAAGGGATGTTGTGAGGAAATGTGATGGTTTGCCTTTGGCTGTGGTAGTGGTTGGTGGTTTATTATCAAGAAAACTTAAATCAAACGAGGAATGGTTGGGGGTGGCCCAAAATATCAATTGGCACCTGCTGAAAGAGCAAGAGAGAATAGCACGTATCTTGGCCCTGAGCTACAATGACTTGCCTTCTCATTTAAAGTCATGCTTTCTCTACCTGGGTCTTTTCCCAGTTGGGATAAACATTCACACCAAAAAGTTGATTCATCTGTGGGTCGCAGAAGGTTTTTTACCACAAGAAGGTGCAGAAACGGCAGAAGGTGTTGCTGAGAAATGCTTGAATGAGTTGATTGGAAGGTGCATGGTTCAAGTGGGTTCAGTAAGTTCGTTAGGCAAAGTCAAAACAATTCGCATCCATGATCTTCTCAGGGATATTTCCGTCTCCAAAGGGGAAGAGGAGCATTTTCTTCGAATATATCTTGGCAGCATGGAGAGCTCATCAGCATCTCAGGTGAATAGATCCCGCCGGCATGCCATACATTCTTGCTACGACCGATATAACTTCCTGAAACACGATGCTCATCATTCACGGTCCCTCCTCTTTTTCAATAGAGAATACAATGCTGATATAGTGAAGAAAATGAGGTTCTATGACCAGCAGTACAATATGAATTTTCTGGTAGAAAAGAAACTGAATTTCATTTTTTGCAAATTCAAGCTTCTCAGGGTTTTAGAGTTAGATGGTGTTCGGGTAGTTCGTCTTCCAAATACAATAGGGGACCTTATTCAATTAAGGTATCTTGGACTGAGGAAGACTAATTTGGAAGAGGAGCTTCCTCCTTCCATTGGGAACTTGCTGAACCTGCAGACACTTGATTTAAGGTACTGTTGTTTTCTTAAGAGGATACCAAATGTAATTTGGAAGATGATCAGTTTGAGGCATTTGCTTCTGTATACTCCATTTGATTCTCCAGACAGCGCTCATCTAAGAATGGATACATTAACCAATTTACAAAGCCTGCCATACATAGAGGCTGGAAGCTGGATAGAAGATGGGGGTCTAGAAAAAATGAAAAATCTCAGGCAATTGGGAATATATGAATTACCTGGGCAAATGGTGAGATCAGTTCTTTCTGTTGCACAAGGATTTCTTCACCTTCACTCACTGTCTCTATCACTTCAATCCGAAGAAGATGAATTTCCAATCTTGATGCAGCTTTCTCCGTGCACTCATCTTCACAAGCTCTCTTTGAATGGGAGGATCAAGAAACTACCGGACCCTCATGAATTCCCGCCAAACCTTATTAAATTAACTTTACATAACTCCCATTTACAGATGGAATCCATTGCCAAACTTGAGAGGTTGCCAAAACTGAAAATGCTTGTTTTAGGGAAAGGGGCATACAACAGGCGGGAATTATTCTTCTCTGCTGATGGATTTTCACAATTGCAAATTCTAAGGCTTAATGTTTTGAAAGAATTGGAGGAGTGGACTGTTGAGGAAAGGGCGGTACCAAGGCTTGAGCACATCATTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAAGCTCTTTCTTGTCTCAAGGAAATAAAGATTATAGGAATGCCAGTAGAATTTGAACAGAGACTACGAACTAAAGACTTGCTGGAATTCCAAAATACCCCTTCAGTTGAATCAACTACAGACATTTTGGCAAACGATTTCAACGGCCGGCACAATGTTGGTGGTTGA 2775 0.4259 MAEVAVSIVVEKLSELLLEQAVNAVSVLDGVRNEVERLKNELRWMQCFLRDADAKQEENQLVRMWVSDIRDIAFEAEELIEIYVYKVACQSRWDRVFRSFHLYEVSRKIGKIRSRIHDVSEKRETYGVVSEIQRQNITSERLRHWRQPWPYAEEECIIELEDDMEFLLDQLLTGDAGRVVSIVGMGGLGKTTLAKKLYNHSKVHSHFDCRAWVYVSREYRRRDILLGILKDADALGRNEIDRSERLREEDMVNRLHTILDDKRYLVVLDDIWSMEVWDSLESAFPRGKMGSKILFTTRNMEIGKHAGAGGNPHKIRTLTEDESLKLLSNKAFPGMNSIPTELENLARDVVRKCDGLPLAVVVVGGLLSRKLKSNEEWLGVAQNINWHLLKEQERIARILALSYNDLPSHLKSCFLYLGLFPVGINIHTKKLIHLWVAEGFLPQEGAETAEGVAEKCLNELIGRCMVQVGSVSSLGKVKTIRIHDLLRDISVSKGEEEHFLRIYLGSMESSSASQVNRSRRHAIHSCYDRYNFLKHDAHHSRSLLFFNREYNADIVKKMRFYDQQYNMNFLVEKKLNFIFCKFKLLRVLELDGVRVVRLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKRIPNVIWKMISLRHLLLYTPFDSPDSAHLRMDTLTNLQSLPYIEAGSWIEDGGLEKMKNLRQLGIYELPGQMVRSVLSVAQGFLHLHSLSLSLQSEEDEFPILMQLSPCTHLHKLSLNGRIKKLPDPHEFPPNLIKLTLHNSHLQMESIAKLERLPKLKMLVLGKGAYNRRELFFSADGFSQLQILRLNVLKELEEWTVEERAVPRLEHIIINRCEKLKKIPEGLKALSCLKEIKIIGMPVEFEQRLRTKDLLEFQNTPSVESTTDILANDFNGRHNVGG 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0048 924 CDD RX-CC_like 2 121 IPR038005 -
Prci5g0048 924 PRINTS Disease resistance protein signature 353 367 - -
Prci5g0048 924 PRINTS Disease resistance protein signature 179 194 - -
Prci5g0048 924 PRINTS Disease resistance protein signature 258 272 - -
Prci5g0048 924 PRINTS Disease resistance protein signature 627 643 - -
Prci5g0048 924 Gene3D - 4 122 - -
Prci5g0048 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 417 IPR027417 -
Prci5g0048 924 PANTHER DISEASE RESISTANCE PROTEIN RP 35 860 IPR044974 GO:0006952
Prci5g0048 924 Coils Coil 21 41 - -
Prci5g0048 924 FunFam Probable disease resistance protein At1g61300 141 311 - -
Prci5g0048 924 Pfam Rx N-terminal domain 5 92 IPR041118 -
Prci5g0048 924 Gene3D - 403 493 IPR036388 -
Prci5g0048 924 Gene3D - 317 402 IPR042197 -
Prci5g0048 924 FunFam Probable disease resistance protein At1g63360 403 492 - -
Prci5g0048 924 Gene3D - 145 308 IPR027417 -
Prci5g0048 924 SUPERFAMILY L domain-like 483 906 - -
Prci5g0048 924 Gene3D Ribonuclease Inhibitor 552 910 IPR032675 -
Prci5g0048 924 Pfam NB-ARC domain 161 405 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0048 Prci-Chr5 1312098 1315990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0048 178 489 WRKY Transcription Factor Family AT5G45050 24.138 1.91e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0048 - - gmx:100788025 1298.49