Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0044 ATGGCGGGTTTATTCTCACTAGGCTGCGGAGGTGGAGGAAGCGACCGGCAGCAAGAAGAGCAAGAGCATCCCAACCCAACCACGGAATTCCTTCCGCCCGAGACCCTATACTGGTACAAGAACGAAGATGTGTCGTCGTACAGAGGATTTGAGCTGTGGAACCAGCAGCCGGAGCAGTTCATGCCTGGAACACGACCGTCGGAACAAGATGTGTACGGGGGGAGTAGGAGCTACGATGATCCGTCGTCGTCGTCGTCGATGAGAGGTCGGGGAGGAATAAACTGCCAAGACTGCGGGAACAAAGCCAAGAAGGATTGCCCGCACATGAGGTGCAGGACTTGCTGTAAAAGCAGAGGCTTCCATTGCCAAACCCACATCAAAAGCACCTGGGTCCCTGCTCCCAAGCGTCGCGAGCGACAACACCACCTTTCAGCTCTGCAGCAACACCAACGACATGGCCAAACAGATGTGCTAGAGCACCAGGATTTTCCTACAGTAGTAAGCTCGCCTGCGGATTTCCGATGCGTGCGGGTGAACTCCATTGACGACGATGACGAACAATATGCGTACCAAACAGCTGTGAATATAGGAGGGCGTGTGTTCAAAGGAATTCTGTACGACCAAGGTCCTGAATGTAATTACAATGCTGGAGATATGAGCGCCTCAGCCGGCGTAGGCGGCGTTCAACCTTTGAACCTCATTGCCGGTGCCGCCAGCGGCGCGTCTGTTTTACCCGCGACGACAATAAGTGGTGGTGCCATGGTTTCGTCTGGTGGGGCACTTGGGGATCCTTCTTTATATCCAGCTCAACTGAACACCTTCATAGCTGGAGGTAGTGGTACGCAATTCTTCCCTCCCTCGAGGTCTTCATAA 873 0.5395 MAGLFSLGCGGGGSDRQQEEQEHPNPTTEFLPPETLYWYKNEDVSSYRGFELWNQQPEQFMPGTRPSEQDVYGGSRSYDDPSSSSSMRGRGGINCQDCGNKAKKDCPHMRCRTCCKSRGFHCQTHIKSTWVPAPKRRERQHHLSALQQHQRHGQTDVLEHQDFPTVVSSPADFRCVRVNSIDDDDEQYAYQTAVNIGGRVFKGILYDQGPECNYNAGDMSASAGVGGVQPLNLIAGAASGASVLPATTISGGAMVSSGGALGDPSLYPAQLNTFIAGGSGTQFFPPSRSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0044 290 Pfam Domain of unknown function (DUF702) 159 211 - -
Prci5g0044 290 Pfam Domain of unknown function (DUF702) 92 155 - -
Prci5g0044 290 NCBIfam putative zinc finger domain, LRP1 type 94 136 IPR006510 -
Prci5g0044 290 MobiDBLite consensus disorder prediction 1 34 - -
Prci5g0044 290 MobiDBLite consensus disorder prediction 58 90 - -
Prci5g0044 290 NCBIfam LRP1 C-terminal domain 163 210 IPR006511 -
Prci5g0044 290 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 272 IPR007818 GO:0003700|GO:0006355
Prci5g0044 290 MobiDBLite consensus disorder prediction 76 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0044 Prci-Chr5 1275165 1277391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0044 1 289 C2H2 Transcription Factor Family AT1G75520 40.220 1.10e-68 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Prci5g0044 DUF702 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0044 - - pcin:129311615 571.622