Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0034 ATGCCTATCTCCCTCGCCCTAGCAACGCCCAAAGTTGCGACTTGCACATCAAAACCCATCCGCATGGATTCTCTGCACCAACCTCTGCCCATGGCACTCTTGTTCGTCATCCCGCTCTTCTTACTTCTGGGCCTGCTCGCTCGGTTTGGCCGGCGGCGTTCCCCCTTCCCGCCAGGCCCCAAAGGCCTTCCCATCATAGGCAACATGCTCATGATGGACCAGCTCACCCACAGGGGTCTAGCCAAGCTCGCCTCTCAATACGGCGGCGTTTTCCACCTCAAAATGGGCTTCCTCAACATGGTGGCCATCTCAGACCCCGACGCCGCTCGTCAAGTTCTTCAAGTCCACGACAACATCTTTTCCAACCGACCAGCCACCATAGCCATCAGCTACCTGACCTACGACCGCGCGGACATGGCGTTCGCTCACTATGGCCCCTTCTGGCGGCAGATGAGGAAGCTGTGCGTCATGAAGCTCTTCAGCCGCAAGCGGGCAGAATCGTGGCAGTCGGTTCGGGACGAGGTGGACGCGGTGGTCCGCAGCGTGGCGAGCAACACCGAGAAGGCGGTGAACATCGGAGAGCTGGTGTTTTCACTGACCAAGAACATAATATATCGGGCGGCGTTCGGGTCGAGTTCGCAGGAGGGACAGGACGAGTTCATTGGGATACTGCAGGAGTTCTCGAAGTTGTTCGGAGCGTTCAACATCGCCGACTTCATGCCTTACCTCGGCTGGATGGACCCGCAAGGCCTGAACACCAGACTCGCCAAGGCACGTGCGTCTCTTGACGGATTCATAGACAAGATCATCGACGACCATATTCAGAAAAGGAGCGACAGAAGCCACGAGGAGACGGACATGGTGGACGAGCTGATCGCTTTTTACAGTGACGAAGCTCAGGTCACTGAGGCTGAGGATCTCCACAACTCCTTCAAACTCACCAAGGATAACATAAAAGCCATCATCATGGACGTGATGTTTGGTGGGACGGAGACGGTGGCGTCGGCAATAGAGTGGGCGATGGCGGAGCTGATGAGAAACCCGGAAGATCTAAAACGGGTCCAACAAGAGCTTGCTGATGTGGTCGGCTTGGATCGTAGAGTTGAAGAGTCCGACTTCGACAAGCTCACCTACCTCAAATGCTCCCTCAAGGAGACGCTGCGCCTTCACCCGCCCATCCCGCTGCTGCTCCATGAGACGGCGGAAGACGCTGAGGTTTCGGGTTACTATATCCCCAAGAAGTCGCGCGTCATGATCAACGCGTGGGCGATCGGGAGGGACAAGTACTCTTGGGACGAACCGGACGCCTTTAAGCCTTCTCGGTTTTTGAAACAGGGCGTTGCCGATTTCAAGGGGAGCAACTTCGAGTTCATTCCGTTCGGGTCCGGTCGGAGGTCATGCCCGGGGATGCAACTCGGACTCTACGCGCTGGACATGGCGGTGGCTCATCTTCTTCACTGTTTCACTTGGGAACTGCCGGACGGGATGAAGCCGAGCGAGATGGATATGAGCGACGTGTTCGGACTCACCGCCCCCAGAGCGAGTCGACTCGTTGCCATTCCCAGCAAGCGCGTGGTGTGCAATCTTTTTTAG 1593 0.5687 MPISLALATPKVATCTSKPIRMDSLHQPLPMALLFVIPLFLLLGLLARFGRRRSPFPPGPKGLPIIGNMLMMDQLTHRGLAKLASQYGGVFHLKMGFLNMVAISDPDAARQVLQVHDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAVVRSVASNTEKAVNIGELVFSLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFMPYLGWMDPQGLNTRLAKARASLDGFIDKIIDDHIQKRSDRSHEETDMVDELIAFYSDEAQVTEAEDLHNSFKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRNPEDLKRVQQELADVVGLDRRVEESDFDKLTYLKCSLKETLRLHPPIPLLLHETAEDAEVSGYYIPKKSRVMINAWAIGRDKYSWDEPDAFKPSRFLKQGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALDMAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRASRLVAIPSKRVVCNLF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0034 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Prci5g0034 530 Pfam Cytochrome P450 57 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 CDD CYP71-like 86 517 - -
Prci5g0034 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PANTHER CYTOCHROME P450 84A1-RELATED 24 529 - -
Prci5g0034 530 SUPERFAMILY Cytochrome P450 49 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 Gene3D Cytochrome P450 50 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 FunFam Cytochrome P450 84A1 49 523 - -
Prci5g0034 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci5g0034 530 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0034 Prci-Chr5 942087 944896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0034 64 529 Monolignol Biosynthesis Gene Families AT4G36220 75.899 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0034 K09755 - zju:107424406 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0034 5 942087 944896 Prci10g0199 10 1313890 1316385 CCT