Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0028 ATGAGAACGCTTTGTGACGCTTGCGAGAGCGCCGCCGCCATCGTTTTCTGCGCCGCTGATGAGGCTGCCCTCTGCCGTGCCTGTGACCACAAGGTTCATATGTGTAATAAGCTGGCCGGCCGGCATGTAAGGGTTGGTCTGGCGAGTCCTAGCGATGTCCCTCGCTGTGACATTTGTGAAAATGCACCTGCGTTCTTCTACTGCGAGACAGATGGAAGTTCACTTTGCTTGCAGTGTGACATGATGGTTCATGTTGGGGGTAAAAGAACGCATGGAAGATATCTTCTTTTTAGGCAGAGAGTTGAGTTTCCGGGAGATAAAACTGGTCTTCCAGAAAACTCAGTTTCACTGCCTCTGGAACCTGGTGGGGCTAAAAGAGGACAAAATCCTCTGCCTAAAATAAATGTGGGAGAGGGACAACAAAATCATAGGTTAGCTCTGGTTGCAGCACCTGAACATGATGCTGACGGTCATGCCATGATGGGAACTAACATGATTGATTTGAACATGAAGCCTCAGAAAATACATGAACAAGCTGCCAATAATCAGCTTGCCTTGGAGGATCATCTTCAGGTCCCTGCATGTCATATCAGTGACATATTGTGA 606 0.4818 MRTLCDACESAAAIVFCAADEAALCRACDHKVHMCNKLAGRHVRVGLASPSDVPRCDICENAPAFFYCETDGSSLCLQCDMMVHVGGKRTHGRYLLFRQRVEFPGDKTGLPENSVSLPLEPGGAKRGQNPLPKINVGEGQQNHRLALVAAPEHDADGHAMMGTNMIDLNMKPQKIHEQAANNQLALEDHLQVPACHISDIL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0028 201 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Prci5g0028 201 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Prci5g0028 201 Gene3D Classic Zinc Finger 2 91 - -
Prci5g0028 201 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci5g0028 201 SMART bboxneu5 51 96 IPR000315 GO:0008270
Prci5g0028 201 CDD Bbox1_BBX-like 56 96 - -
Prci5g0028 201 Pfam B-box zinc finger 52 90 IPR000315 GO:0008270
Prci5g0028 201 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 144 - -
Prci5g0028 201 CDD Bbox1_BBX-like 4 47 - -
Prci5g0028 201 FunFam B-box zinc finger protein 19 2 92 - -
Prci5g0028 201 SUPERFAMILY B-box zinc-binding domain 48 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0028 Prci-Chr5 898830 901462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0028 1 183 C2C2-CO-like Transcription Factor Family AT4G38960 59.563 6.79e-72 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Prci5g0028 zf-B_box 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0028 - - pcin:129311612 417.927