Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0017 ATGCAATCCACTTCCAAACCAATCAAATTTGTTATCAGTCGTAATTGGCATGTTGTGGCTGGTGAAGAAAGTATGGAGAAAGAAGATAAAAAACTTAGAGAGCTCAGGGTGCTTGAAGCAGTTTATCCTCGTCTCTCTGCCATTCCTCCGAGCCCTTTTGTTGCTTTGGATGTAGAAGAGGAAGATTACGATGATAAACTCACTCCTCCGGTCCCCATCATTCCCATTGAGGAAGGGCAGTCTGTGGATGATAAACCCGAATTGGCAGCATGCAGAGACGCTTCTGCCACTGTACAGTCACAAAACTTGCACCACTATATGTCAGTTATCACGGAACCAATTCAATGTAATACCTCTTCTCTTGCCTTAACCGTCTGCGGAAATCCCACACCTGGTTTGGAAGTAGATTTAGTTGCTGCCTCTGCTGTTGTGAATGCCATTATGAAGAGTAGTGGGCAAGGAAGCTTGATTGATATGGATCTACTCGTTAAAATATTTAATGACCCGTTAATGATTGAGAAATTAGCTAATGATCATAGAACTGCTGCCACAACTGCAAGTGCATCCTCTAATACAATGGTAATGCCCGCTTCTGGATCGAAGCTAGCAGTACCTTCAGTTCCATCGTCGACACCCACACTTGGTGAGCTAACTCATTGGCTTACACCCACAATCACTACGGGTTTGTTATCTTGTTCAGGGTTGAAGCCTGAAATTTCGCCAGCCATTCCTGAGAAGCTGGCAATTCCATCAATTCCAATGTCAATGCCTGGTAAACCTGCAATTCCCTCTGTTCCTGTGCAGACTCCTGTACCTGATATGCGGAGGCATGTGAACAAAAATTGTCACCGTATGTCAAATGGAGTTCTACCATTTTTAGATGCCCAACCTCCTCAACAAGAAGCTTTTCTGGCAACTGGGGCGATGCATGCAACATCTTTGGCTTCCATTCTAGCGATTTCTTCTAGTGGGAACGTGCAACATTCAATGACAAGCCAGCTGCGATCTACTGCCAGGGCAATGCCTCACCAATTAAGTTCAGGTTCAGCATTTGCTGCCAAGGAAGCGCATTCTGTCAAGGATGCCAACTATTTAAAGAACTTGATTAGGCAACACGGTTCAGATAAGCAAGACACACAGGACTCACGTATAGGTATCCGGCACAGTAACTTCCAAAATATGAAAACGGTACATAACGACAAACACGGAGAAGTTAAACACACATTCCAGAAAACTTGCTTATACTTTAACAGCTCAAGGGGGTGTCGAAATGGTTCTAGCTGCCCCTATCAGCATGATATGTCAGTTCAATGGGGAGCTGGCGACGCTCTAGGGGGTTCAAATTCAAAAAGATTGAAACTAGAACCTGAAATTAAGGGAAGAATATAA 1389 0.4413 MQSTSKPIKFVISRNWHVVAGEESMEKEDKKLRELRVLEAVYPRLSAIPPSPFVALDVEEEDYDDKLTPPVPIIPIEEGQSVDDKPELAACRDASATVQSQNLHHYMSVITEPIQCNTSSLALTVCGNPTPGLEVDLVAASAVVNAIMKSSGQGSLIDMDLLVKIFNDPLMIEKLANDHRTAATTASASSNTMVMPASGSKLAVPSVPSSTPTLGELTHWLTPTITTGLLSCSGLKPEISPAIPEKLAIPSIPMSMPGKPAIPSVPVQTPVPDMRRHVNKNCHRMSNGVLPFLDAQPPQQEAFLATGAMHATSLASILAISSSGNVQHSMTSQLRSTARAMPHQLSSGSAFAAKEAHSVKDANYLKNLIRQHGSDKQDTQDSRIGIRHSNFQNMKTVHNDKHGEVKHTFQKTCLYFNSSRGCRNGSSCPYQHDMSVQWGAGDALGGSNSKRLKLEPEIKGRI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0017 462 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 6 455 - -
Prci5g0017 462 ProSiteProfiles Zinc finger C3H1-type profile. 408 435 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0017 Prci-Chr5 523581 526198 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci5g0017 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0017 - - gmx:102661587 407.142