Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0014 ATGAGGCGAGCAAGAAAATCGTCCAGCAGGGTTTCATGGGCTACCGGAGGGAATCTCTGTCAGGTAAAATTGTTTGTATCTGAGGGTTGCCCTTCAAAAGTTGGCCAGAAATCTCAAGATCAACTTCAAGCAAAGGTGTCATCAATGCTAAATTCAAGTACTATTGAATTTAATAATTTACCCCCTGGGTTTGAATGCAATCCACTTCCAAACCAATCAAAGTATGAACTCTCTTGCATTCCTCAGATTAATTGGAGATGCCCTCCTCCGTTTGTTATCAGTCGTAATTGGCATGTTGTGGCTGGTGAAGAAAGTATGGAGAAAGAAGATAAAAAACTTAGAGAGCTCAGGGTGCTTGAAGCAGTTTATCCTCGTCTCTCTGCCATTCCTCCGAGCCCTTTTGTTGCTTTGGATGTAGAAGAGGAAGATTACGATGATAAACTCACTCCTCCGGTCCCCATCATTCCCATTGAGGAAGGGCAGTCTGTGGATGATAAACCCGAATTGGCAGCATGCAGAGACGCTTCTGCCACTGTACAGTCACAAAACTTGCACCACTATATGTCAGTTATCACGGAACCAATTCAATGTAATACCTCTTCTCTTGCCTTAACCGTCTGCGGAAATCCCACACCTGGTTTGGAAGTAGATTTAGTTGCTGCCTCTGCTGTTGTGAATGCCATTATGAAGAGTAGTGGGCAAGGAAGCTTGATTGATATGGATCTACTCGTTAAAATATTTAATGACCCGTTAATGATTGAGAAATTAGCTAATGATCATAGAACTGCTGCCACAACTGCAAGTGCATCCTCTAATACAATGGTAATGCCCGCTTCTGGATCGAAGCTAGCAGTACCTTCAGTTCCATCGTCGACACCCACACTTGGTGAGCTAACTCATTGGCTTACACCCACAATCACTACGGGTTTGTTATCTTGTTCAGGGTTGAAGCCTGAAATTTCGCCAGCCATTCCTGAGAAGCTGGCAATTCCATCAATTCCAATGTCAATGCCTGGTAAACCTGCAATTCCCTCTGTTCCTGTGCAGACTCCTGTACCTGATATGCGGAGGCATGTGAACAAAAATTGTCACCGTATGTCAAATGGAGTTCTACCATTTTTAGATGCCCAACCTCCTCAACAAGAAGCTTTTCTGGCAACTGGGGCGATGCATGCAACATCTTTGGCTTCCATTCTAGCGATTTCTTCTAGTGGGAACGTGCAACATTCAATGACAAGCCAGCTGCGATCTACTGCCAGGGCAATGCCTCACCAATTAAGTTCAGGTTCAGCATTTGCTGCCAAGGAAGCGCATTCTGTCAAGGATGCCAACTATTTAAAGAACTTGATTAGGCAACACGGTTCAGATAAGCAAGACACACAGGACTCACGTATAGGAATTAACGTAAATGATCTTGCTCTTGGTTTCCTGAGTCATTTTAGAAGGGTCATTCTTTGA 1458 0.4403 MRRARKSSSRVSWATGGNLCQVKLFVSEGCPSKVGQKSQDQLQAKVSSMLNSSTIEFNNLPPGFECNPLPNQSKYELSCIPQINWRCPPPFVISRNWHVVAGEESMEKEDKKLRELRVLEAVYPRLSAIPPSPFVALDVEEEDYDDKLTPPVPIIPIEEGQSVDDKPELAACRDASATVQSQNLHHYMSVITEPIQCNTSSLALTVCGNPTPGLEVDLVAASAVVNAIMKSSGQGSLIDMDLLVKIFNDPLMIEKLANDHRTAATTASASSNTMVMPASGSKLAVPSVPSSTPTLGELTHWLTPTITTGLLSCSGLKPEISPAIPEKLAIPSIPMSMPGKPAIPSVPVQTPVPDMRRHVNKNCHRMSNGVLPFLDAQPPQQEAFLATGAMHATSLASILAISSSGNVQHSMTSQLRSTARAMPHQLSSGSAFAAKEAHSVKDANYLKNLIRQHGSDKQDTQDSRIGINVNDLALGFLSHFRRVIL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0014 485 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0014 Prci-Chr5 523581 530139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci5g0014 82 153 Homeobox Transcription Factor Family AT4G02560 40.278 4.81e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0014 - - gmx:102661587 410.609