Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci5g0013 ATGAGGCGAGCAAGAAAATCGTCCAGCAGGGTTTCATGGGCTACCGGAGGGAATCTCTGTCAGTTTGTTATCAGTCGTAATTGGCATGTTGTGGCTGGTGAAGAAAGTATGGAGAAAGAAGATAAAAAACTTAGAGAGCTCAGGGTGCTTGAAGCAGTTTATCCTCGTCTCTCTGCCATTCCTCCGAGCCCTTTTGTTGCTTTGGATGTAGAAGAGGAAGATTACGATGATAAACTCACTCCTCCGGTCCCCATCATTCCCATTGAGGAAGGGCAGTCTGTGGATGATAAACCCGAATTGGCAGCATGCAGAGACGCTTCTGCCACTGTACAGTCACAAAACTTGCACCACTATATGTCAGTTATCACGGAACCAATTCAATGTAATACCTCTTCTCTTGCCTTAACCGTCTGCGGAAATCCCACACCTGGTTTGGAAGTAGATTTAGTTGCTGCCTCTGCTGTTGTGAATGCCATTATGAAGAGTAGTGGGCAAGGAAGCTTGATTGATATGGATCTACTCGTTAAAATATTTAATGACCCGTTAATGATTGAGAAATTAGCTAATGATCATAGAACTGCTGCCACAACTGCAAGTGCATCCTCTAATACAATGGTAATGCCCGCTTCTGGATCGAAGCTAGCAGTACCTTCAGTTCCATCGTCGACACCCACACTTGGTGAGCTAACTCATTGGCTTACACCCACAATCACTACGGGTTTGTTATCTTGTTCAGGGTTGAAGCCTGAAATTTCGCCAGCCATTCCTGAGAAGCTGGCAATTCCATCAATTCCAATGTCAATGCCTGGTAAACCTGCAATTCCCTCTGTTCCTGTGCAGACTCCTGTACCTGATATGCGGAGGCATGTGAACAAAAATTGTCACCGTATGTCAAATGGAGTTCTACCATTTTTAGATGCCCAACCTCCTCAACAAGAAGCTTTTCTGGCAACTGGGGCGATGCATGCAACATCTTTGGCTTCCATTCTAGCGATTTCTTCTAGTGGGAACGTGCAACATTCAATGACAAGCCAGCTGCGATCTACTGCCAGGGCAATGCCTCACCAATTAAGTTCAGGTTCAGCATTTGCTGCCAAGGAAGCGCATTCTGTCAAGGATGCCAACTATTTAAAGAACTTGATTAGGCAACACGGTTCAGATAAGCAAGACACACAGGACTCACGTATAGGTATCCGGCACAGTAACTTCCAAAATATGAAAACGGTACATAACGACAAACACGGAGAAGTTAAACACACATTCCAGAAAACTTGCTTATACTTTAACAGCTCAAGGGGGTGTCGAAATGGTTCTAGCTGCCCCTATCAGCATGATATGTCAGTTCAATGGGGAGCTGGCGACGCTCTAGGGGGTTCAAATTCAAAAAGATTGAAACTAGAACCTGAAATTAAGGGAAGAATATAA 1425 0.447 MRRARKSSSRVSWATGGNLCQFVISRNWHVVAGEESMEKEDKKLRELRVLEAVYPRLSAIPPSPFVALDVEEEDYDDKLTPPVPIIPIEEGQSVDDKPELAACRDASATVQSQNLHHYMSVITEPIQCNTSSLALTVCGNPTPGLEVDLVAASAVVNAIMKSSGQGSLIDMDLLVKIFNDPLMIEKLANDHRTAATTASASSNTMVMPASGSKLAVPSVPSSTPTLGELTHWLTPTITTGLLSCSGLKPEISPAIPEKLAIPSIPMSMPGKPAIPSVPVQTPVPDMRRHVNKNCHRMSNGVLPFLDAQPPQQEAFLATGAMHATSLASILAISSSGNVQHSMTSQLRSTARAMPHQLSSGSAFAAKEAHSVKDANYLKNLIRQHGSDKQDTQDSRIGIRHSNFQNMKTVHNDKHGEVKHTFQKTCLYFNSSRGCRNGSSCPYQHDMSVQWGAGDALGGSNSKRLKLEPEIKGRI 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci5g0013 474 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 22 467 - -
Prci5g0013 474 ProSiteProfiles Zinc finger C3H1-type profile. 420 447 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci5g0013 Prci-Chr5 523581 530139 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci5g0013 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci5g0013 - - gmx:102661587 406.757