Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci597g0003 ATGGCAGAGAGTCCGGTGTTGTTCTTACTGGACAAGCTAACATCTTTGCTGCAAGAAGAGGTGCAACTGCTTAAGGGTGTTCGCACAGAGGTTCAGTTCATCAAAGATGAACTTGAGCGCCTCAAGGCCATCTTAAGGATGGCTGATGCGTTGGAGGACAAAGACCCTGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTAGCTCACGACATGGAAGACGCCATTGATGAGTTCACCATTCGCCTCGTGAATCACCGTGGCCATGGCCACGATTCTGCTCTCAGAAGGTTTCCTTCATCCATCCAAGCTCTCAGAGCTCGGCATCGGATTGCTTCTAACTTACAAGAGATCAAAGCCAGAGTGGAAAACATCTCAAAGGGTCGTCGCAGCATAACTGAGACCGGGTCAAGCTCGAGTCATTTTCACAAGTCGAGGCTTGATAGTCAAGGAGATGCACTTCTGCTCGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAGCAGCTGATTGACTTGCTTTTCCAGGAGGAGCAAGGAAAGGTGGTGATACCTATCTATGGAATGGGTGGGCTGGGGAAAACCACGGTGGCAAAGCAGGTCTATGATGACCCAAAATTGAAGAAGCGTTTCAAGATGCATGCTTGGGTCACAGTTTCCCAATCTTTCAAGATCAAGGAGCTCCTAAGAGACCTGGTTCAACAGCTTTATAAAGTTATAGGGAAACCAGCTCCTGCGGAAGTTGGCACAATGAAAAGTGACAATCTGAAGGAGGTGGTCAAGAGTCTGCTTCAACAAAGCAGGTACCTCATCGTCCTGGATGACATATGGCGGGTAAATGCGTGGGATGCTATCAAACTTGCTTTGCCTAACAACAACTATGGCAGTAGAATAATGCTCACCACAAGAAACAGAGAAGTAGCACTTTCTTGCTGCACTGAGTTGCAAGGCAAGATCTATAACCTGGAATTCTTACCTGAGCATGAAGCATGGTCTCTTTTCTGCAAGAAAACATTTCAGGGGAATGCATGTCCTCCATATTTGGAGGAGTCTTGCAAGACTATATTGAAAAGATGTGGGGGATTGCCGCTAGCAATTGTGGCAATCAGTGGTGCTTTGGCTACAAAAGACAAGAATAACATAGAAGAATGGCTGGTTGTAAGCAGAAGTATTGCATCTGAAATTGAAAGCAGTGACAGAATGGAGGATATGAACAAAGTGCTTTCCCTAAGTTTCAACGAATTGCCTTACTATCTTAAATCCTGTTTGTTGTACCTGATCATCTTTCCAGAATTTTATGCCGTTGACCATATGAGGTTGATTCGCTTGTGGATAGCTGAAGGGTTTGTCACTGGAGAAGAAGGAAGGACACTGGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACAGGAGCCTGATTCAAGTGGTAGAGAAAGGCAGTGATGGCAGGATGAAGACTTGTCGTGTTCACGACTTTCTAAGGGACATAATCAATTTGAAGTCAAAAGATCAAAACTTTGCAACATTGGCTACAGACCAGGACATGATATGGCCAGAAAGAGTTCGTCGCCTGTCAGTAATGAGTAGTTTACAGAACGTACAGCAAAACAGGACCTCATTCCAATTGCGTTCTCTGCTATTATTTTCTTTAGCAGACTCACATGATGATATCTCCATATCTTCACTATTCTCAAATGGTTGTAGGCTTCTCAAGGTACTAGACTTGCAAGATGCACCTTTGGAATCGTTTCCTGCTGAGATTGTCAACCTTTACCACCTGAAGTATCTAAGCCTGAAGAATACCAATGTTAAAAGCATTCCAGGTTCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTGAAACACTCCCATGTAACTGAATTGCCAGCTGAAATCCTGGAGCTGCATCGACTACGCCACCTCCTGGTGTATCGTTATGAGATTGAATCCTATGCTTACTTCCACTCAAGGCATGGTTTCAAGCTGCGAGGCCCAATAGGATGTATGCAATCTCTGCAAAAGCTTTGTTTCATAGAGGCAGACCAAGGAAGTCAAGACCTGATGGTTGAACTAGGCAAGCTGACTCAACTGAGGAGGCTGGGCATTAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTTTGCTCATCCATTCAGAAGATGACCAATCTCAGGTCTCTATCCATAACTGCAATCGAAGAAGATGAGATCATTGACATTCAGAACATTGTCAAGCCTCCTCCATACCTGAGACAATTGTACTTATGTGGACGTCTAGAGAAGTTACCTGAATGGATACCCTCTCTCCACAATCTGGTCAGAGTATACTTGAAATGGAGCAGGTTAGAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCCAATCTAATTCATCTCGAGTTTTTACAGGTTTTTGTTGGAGAGACATTGCAATTCAAGGCAGACAAATTTCCAAGTCTGAAGCTGTTAGGCCTTGATGATTTAGATGGACTGAAATCCGTGATAGTGGAGGAAGGAGCAATGCCGAATCTGAAAAGATTAATTATCCAGCGATGTGGATCACTGAAGCAGGCACCTTCAGGCATAGAACATTTGAGCAAGCTAAAAGCAATTGACTTCTTTGATATGCCTGATGAATTGATCAATGCCCTGAGTCCAAATGGAGGTAAAGATAATTGGAGAGTAGCACACGTACCAGCGGTTTATTCGAACTACTGGAAATCTGGTGCCTGGGATGTTTACTCATTGGACACTCTTGGAGAGAGAGACAGTTCTTCAAGTAATGTTGCAATGAAAAGTCATGAGATTCGTCCACTTTGGAAGGTTTAA 2838 0.4405 MAESPVLFLLDKLTSLLQEEVQLLKGVRTEVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGHGHDSALRRFPSSIQALRARHRIASNLQEIKARVENISKGRRSITETGSSSSHFHKSRLDSQGDALLLEEADLVGIEKPKKQLIDLLFQEEQGKVVIPIYGMGGLGKTTVAKQVYDDPKLKKRFKMHAWVTVSQSFKIKELLRDLVQQLYKVIGKPAPAEVGTMKSDNLKEVVKSLLQQSRYLIVLDDIWRVNAWDAIKLALPNNNYGSRIMLTTRNREVALSCCTELQGKIYNLEFLPEHEAWSLFCKKTFQGNACPPYLEESCKTILKRCGGLPLAIVAISGALATKDKNNIEEWLVVSRSIASEIESSDRMEDMNKVLSLSFNELPYYLKSCLLYLIIFPEFYAVDHMRLIRLWIAEGFVTGEEGRTLEEVAESYLKELLNRSLIQVVEKGSDGRMKTCRVHDFLRDIINLKSKDQNFATLATDQDMIWPERVRRLSVMSSLQNVQQNRTSFQLRSLLLFSLADSHDDISISSLFSNGCRLLKVLDLQDAPLESFPAEIVNLYHLKYLSLKNTNVKSIPGSIKKLQNLETLDLKHSHVTELPAEILELHRLRHLLVYRYEIESYAYFHSRHGFKLRGPIGCMQSLQKLCFIEADQGSQDLMVELGKLTQLRRLGIRKLKKEDGAAFCSSIQKMTNLRSLSITAIEEDEIIDIQNIVKPPPYLRQLYLCGRLEKLPEWIPSLHNLVRVYLKWSRLEEDPLVYLQDLPNLIHLEFLQVFVGETLQFKADKFPSLKLLGLDDLDGLKSVIVEEGAMPNLKRLIIQRCGSLKQAPSGIEHLSKLKAIDFFDMPDELINALSPNGGKDNWRVAHVPAVYSNYWKSGAWDVYSLDTLGERDSSSSNVAMKSHEIRPLWKV 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci597g0003 945 Pfam Rx N-terminal domain 7 92 IPR041118 -
Prci597g0003 945 SUPERFAMILY L domain-like 492 882 - -
Prci597g0003 945 FunFam Probable disease resistance protein At1g61300 150 315 - -
Prci597g0003 945 Gene3D Ribonuclease Inhibitor 501 889 IPR032675 -
Prci597g0003 945 PANTHER DISEASE RESISTANCE PROTEIN RP 31 856 IPR044974 GO:0006952
Prci597g0003 945 Coils Coil 24 54 - -
Prci597g0003 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 427 IPR027417 -
Prci597g0003 945 FunFam Probable disease resistance protein At1g63360 413 502 - -
Prci597g0003 945 Gene3D - 6 112 - -
Prci597g0003 945 CDD RX-CC_like 2 127 IPR038005 -
Prci597g0003 945 Gene3D - 326 412 IPR042197 -
Prci597g0003 945 Gene3D - 149 317 IPR027417 -
Prci597g0003 945 Gene3D - 413 500 IPR036388 -
Prci597g0003 945 Pfam Leucine rich repeat 572 628 IPR001611 GO:0005515
Prci597g0003 945 PRINTS Disease resistance protein signature 184 199 - -
Prci597g0003 945 PRINTS Disease resistance protein signature 264 278 - -
Prci597g0003 945 PRINTS Disease resistance protein signature 360 374 - -
Prci597g0003 945 PRINTS Disease resistance protein signature 614 630 - -
Prci597g0003 945 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci597g0003 184 628 WRKY Transcription Factor Family AT5G45050 21.522 5.55e-09 58.5