Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci597g0001 ATGGCCGAGAGTGCAGTGTCGTTTCTACTGAGCAAGCTGACTTCCATACTCGAAGAACAAGTGCAGCTGCTGAGTGGAGTTCACAAAGAGGTTCAGTTCATCAAAGATGAACTAGAGCGCCTCAGTGCCATCTTAAGGGTGGCTGATTCTTTGGAGGACGAAGACCCTGAACTCAAAGTTTGGGTGAAGCAAGTCAGAGATGTGGCTCATGACATGGAAGATGCCATAGATGAGTTCACTATTCGCCTTGTGAGTCATCGTGAGCAAGGCCAAAATTCTTGTCTCAGCAGGTTTTCTTCCGCCATCAAGGCTCTCAGAGCTCGGCATTGGATTGCTTCTGAGATTCAAGAGATCAAAGGCAGATTGGAAAACATCTCAAAGGGTCGTTGCAACATGACTGAGACTGGATCAAGCTTCCGTAATCAGTATACATCAAGGCTTGATAGCCAAGACGATGCGCTTTTGCTTGATGAAGCTGACCTTGTGGGTATTGAGAAGCCTAAAAAGCATTTAATTGACTTACTTTTCGAGGAGGAACCTGGAAGAGTAGTGATTCCTATTTATGGAATGGGAGGATTGGGGAAAACCACGCTGGCAAAGCAGGTCTATGATGACCCAAAAGTGAAGAAGCTTTTCAGGATGCACGCATGGGTCACTATTTCCCAATCTTTCAAGATCCATGAGCTCCTAAGAGAGCTGGTTCAACAGCTCCATAAAGTTATAGGAAAAACAGCTCCTGCAGAAGTTGGCACCATGAAAAGTGGCAGTCTAAAGGAGGTGATCAAGAGTTTGCTTCTGCAAAGAAGGTACCTGATCATCCTGGATGACATTTGGCGAGTAAATGCATGGGATGCTATTCAACATGCTTTGCCTAACAACAACTATGGCAGTAGAATCATACTCACAACTCGGAATAAGGATGTAGCAGCTTATTCTTGCACCAAATTCCATGATAAGGTCTATAACTTGGATTTTTTGCCTCAGCATGAATCATGGTCTCTTTTTTGTAACAAGACCTTTCGAGGGAATCCATGTCCTCCTCATTTGGAGGAGTCTTGCAAGTGTATCTTGAAAAGATGTGGGGGATTGCCTCTTGCAATTGAGGCAATCAGTGGTGTTCTGGCTTCAAAAGACAGAACCAACTTGGAAGAATGGTTGATTGTTTGTAAGAGTTTTGCATCTGAAATTGAAGGCAACGACAAACTGGAGGATACAAAGAAAGTGCTTTGTTTAAGTTTCAACGATTTGCCATATTATCTTAAATCATGTTTGTTGTACCTAATCATCTTTCCAGAATTTTATGCTATTGAACGTATCAAGTTGATTCGGTTGTGGATAGCTGAAGGATTTGTCAATGGAGAAGAAGGAATGACACCAGAAGAAGTTGCAGAGAGTTATCTGAAGGAGCTCCTGAATAGGAGTTTGATACAAGTGGTAGAGAAACACAGTGATGGCAGGATCAAGACTTGTCGTATCCATGAGTTTCTACGGGAGATCATCAATTTAAAGTCAAGAGATCAGAACTTTGCAACAATAGCCAAAGACCAGGACATAATCTGGCCAGAGAAAGATGCACCTTTGGAGTCGTTTCCTGCAGAGATTGTCAACCTTTTCCACCTCAAGTATCTAAGCTTGAAGAGTACGAAGGTGAAAAATATCCCAACCTCCATCAAGAAGCTTCAAAATTTGGAGACATTAGATCTCAAACATTCCTATGTCACTGAATTACCACCTGAAATCTTGGAGCTGCATCAACTACGCCACCTCCTGGTGTATCGCTATAAGATTGAATCCTATGACAATTTCAACTCAAGGCGTGGTTTCAAGTTGCCAGGCTTGATTGGATGTATGCAATCTCTGCAGAAGCTTTGTTTCATAGAAGCAGACCAAGGAAGTCAAGACTTGATGGTTGAACTAGGAAAGCTAACCCAACTCAGGAGGCTGGGTATGAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTGTGCTCGTCCATTCAGAAGATGACCAATCTCAGGTCTCTGTCCATAACCGCAAGAAAAGATTATGAGATCATTGATATTCAGAACATAGCCAAGCCTCCTACATACCTTCGGCGATTGTACTTAAGAGGACGTTTAGAGAAGTTACCTAAATGGATTACCTCTCTCCAAAATTTGGTCAGATTGTATCTAAAATGGAGCAGTTTAAAGGAGGATCCTCTAATATATCTTCAAGATTTGCCCAATCTAATACAACTTGAGTTTCTGCAGGTTTATGTTGGCGAGAAATTGCATTTCAAACCAATGGATTTCCAAAACAGTAAAGCCAAGGGATTAGCTGGTTTTTCATGTGATTCAGAAGCAGAGCCCCATGCG 2355 0.4242 MAESAVSFLLSKLTSILEEQVQLLSGVHKEVQFIKDELERLSAILRVADSLEDEDPELKVWVKQVRDVAHDMEDAIDEFTIRLVSHREQGQNSCLSRFSSAIKALRARHWIASEIQEIKGRLENISKGRCNMTETGSSFRNQYTSRLDSQDDALLLDEADLVGIEKPKKHLIDLLFEEEPGRVVIPIYGMGGLGKTTLAKQVYDDPKVKKLFRMHAWVTISQSFKIHELLRELVQQLHKVIGKTAPAEVGTMKSGSLKEVIKSLLLQRRYLIILDDIWRVNAWDAIQHALPNNNYGSRIILTTRNKDVAAYSCTKFHDKVYNLDFLPQHESWSLFCNKTFRGNPCPPHLEESCKCILKRCGGLPLAIEAISGVLASKDRTNLEEWLIVCKSFASEIEGNDKLEDTKKVLCLSFNDLPYYLKSCLLYLIIFPEFYAIERIKLIRLWIAEGFVNGEEGMTPEEVAESYLKELLNRSLIQVVEKHSDGRIKTCRIHEFLREIINLKSRDQNFATIAKDQDIIWPEKDAPLESFPAEIVNLFHLKYLSLKSTKVKNIPTSIKKLQNLETLDLKHSYVTELPPEILELHQLRHLLVYRYKIESYDNFNSRRGFKLPGLIGCMQSLQKLCFIEADQGSQDLMVELGKLTQLRRLGMRKLKKEDGAALCSSIQKMTNLRSLSITARKDYEIIDIQNIAKPPTYLRRLYLRGRLEKLPKWITSLQNLVRLYLKWSSLKEDPLIYLQDLPNLIQLEFLQVYVGEKLHFKPMDFQNSKAKGLAGFSCDSEAEPHA 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci597g0001 785 Gene3D Ribonuclease Inhibitor 520 768 IPR032675 -
Prci597g0001 785 Gene3D - 4 112 - -
Prci597g0001 785 Pfam Rx N-terminal domain 5 93 IPR041118 -
Prci597g0001 785 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
Prci597g0001 785 Gene3D - 152 316 IPR027417 -
Prci597g0001 785 FunFam Probable disease resistance protein At1g63360 413 502 - -
Prci597g0001 785 CDD RX-CC_like 2 127 IPR038005 -
Prci597g0001 785 PRINTS Disease resistance protein signature 558 574 - -
Prci597g0001 785 PRINTS Disease resistance protein signature 360 374 - -
Prci597g0001 785 PRINTS Disease resistance protein signature 264 278 - -
Prci597g0001 785 PRINTS Disease resistance protein signature 184 199 - -
Prci597g0001 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 427 IPR027417 -
Prci597g0001 785 Gene3D - 326 412 IPR042197 -
Prci597g0001 785 SUPERFAMILY L domain-like 525 750 - -
Prci597g0001 785 PANTHER DISEASE RESISTANCE PROTEIN RP 27 748 IPR044974 GO:0006952
Prci597g0001 785 FunFam Probable disease resistance protein At1g61300 149 316 - -
Prci597g0001 785 Coils Coil 34 54 - -
Prci597g0001 785 Gene3D - 413 503 IPR036388 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci597g0001 157 308 WRKY Transcription Factor Family AT4G12020 28.571 9.58e-07 50.8