Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci593g0001 ATGATTAAAACCCGTTCATCTAATGTCAAAGGAACTTTTGGCTATCTTGATCCTGAATACGTGTCAACAAAAACTTTTACCAAGAAAAGTGATGTTTATAGTTTTGGTGTGCTACTCTTTGAATTGATTACTGGCAGGAATCCACAGCAGGGCATGATGGAATATGTGAAACTAGCAGCCATGGAAGCCGAGAGTAAGGTTGGATGGGAAGAAATTGTGGATTCACAGCTTAATGGAAAATATGATGTGCCTAGGCTTAATGATATGGCTTGTCTTGCTTTGAAATGTGTCAGTGAAGCATCCAGAGACCGACCTTCCATGAGGGACATTGCTGGATCATTATCTCAGCTCTATAAGAAGCAGCATTATTGTAGAGATGATAATACACAGTCTCCTGCTGCAGTAAATGAAGTTTCCATTGAAGTGGAACGTCTAAAAATCCAGGAATTTTCATCCACAGAGCGCTCAATCTTGTTGCACAGATTGCATAGCCGATGA 498 0.4036 MIKTRSSNVKGTFGYLDPEYVSTKTFTKKSDVYSFGVLLFELITGRNPQQGMMEYVKLAAMEAESKVGWEEIVDSQLNGKYDVPRLNDMACLALKCVSEASRDRPSMRDIAGSLSQLYKKQHYCRDDNTQSPAAVNEVSIEVERLKIQEFSSTERSILLHRLHSR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci593g0001 165 Gene3D Transferase(Phosphotransferase) domain 1 2 142 - -
Prci593g0001 165 Pfam Protein tyrosine and serine/threonine kinase 7 112 IPR001245 GO:0004672|GO:0006468
Prci593g0001 165 PANTHER OS01G0750732 PROTEIN 6 129 - -
Prci593g0001 165 SUPERFAMILY Protein kinase-like (PK-like) 5 112 IPR011009 -
Prci593g0001 165 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci593g0001 6 153 Receptor kinase-like Gene Family AT2G23200 37.419 3.50e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Prci593g0001 PK_Tyr_Ser-Thr 3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci593g0001 - - pcin:129297718 329.331