Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci58g0002 ATGTATTTCTTCGAAATCCTTCAACAAGATCATCATCATCAACAAGACGAGGCTAAAAATGCTGCTACATTAATAGGCACAGAAGACCATAGCGCTAGTAGTACTCATCATGAACAATACAATATTACCAGAGAAGAGAATGAACTAGTCTCTCTTTCTCTAGGGTTTTCTTCATCCAAAGATCAGAATTACAAAAGTTGCAATTATAGAAATTCTCTAAGAGAGGACGATCAGAAGGATTTGGGACAATCATCATCAGGGCTTGCTCTAGGGCTTGATGTCAGATTTGACCCTACATCATCATCATCAGCTGAAGTTGAAAGTACAAACATCATAACCATTGAAGGTACCTCTGATGATGATGATGATGATGATGAGATGCAGCCACGCAGTAAGGTTCTCAAGAAGATGAGGACTTCTGAAGATCACAGTATTACTGCTTGTAAAGCTACTCAACAACTTCATCATCAGCTCAAGAAAACTAGGGTTTCTATCCGAGCCAGATGTGATACCCAAACGATGGATGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCAAAGGGAAATCCATGCCCAAGGGCGTACTACAGATGCACTGCGTCACCATCTTGTCCTGTCAGAAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATCTTGATAACCACTTATGAAGGAACTCATAATCACCCTCTTCCTATCTCATCACCCACACCTTTCACCTCCTTATCCTCCATTATTGCTCCTCTAGCTCCTCCTCCATCTTCGTCACAACAAAATACAAAATTCGCCACGAAAATTTACAACGAAAATCAGGAAAAGTCTTTACCTTCCATAATCTTCAATAATAATGTTCTCAATAGCTTGTCTAGTGCCTCTTCCATTTCAAGACCATCACCACCACCATATCAGCATCAGTATTTCCCAAACTCTTCCATTATCTTTATTTCACCACAACCACCACCTTCTTCTTCTTCCTCCTCATCCTCCTCCTCTCATCATCAGTTCACCAGAACATTCACTTCCTCGGGCTTCTCTTCCATTAATGGAACCGTACTACTGGCCCCCCACCAGATGAACAGATCAAGCCAAAGCAGTGATGGTAAAGAACCATTAACAATTGAAGATGAAACAAAAGCAATCACCAGTACTAATCCCAAGTTTCAGTCAGCCAATATTGCAGCAGCTCTCACTTCCTACGTCAATACTAATAATAATGGAGGTAGCAGAAATGGCTTGGACTGCATATTTAATCAACATCAAGCAGCGTCTAGAAGCGGCTATAACTCTGGTTCCGCTTATTCAGATAGAAGCAAGCTGATGCTGGAACAGTGGAAGAGAAAGAATTTGACTATTGCTCCGAAGGAATCAAACCTCTGA 1386 0.4113 MYFFEILQQDHHHQQDEAKNAATLIGTEDHSASSTHHEQYNITREENELVSLSLGFSSSKDQNYKSCNYRNSLREDDQKDLGQSSSGLALGLDVRFDPTSSSSAEVESTNIITIEGTSDDDDDDDEMQPRSKVLKKMRTSEDHSITACKATQQLHHQLKKTRVSIRARCDTQTMDDGCQWRKYGQKIAKGNPCPRAYYRCTASPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPISSPTPFTSLSSIIAPLAPPPSSSQQNTKFATKIYNENQEKSLPSIIFNNNVLNSLSSASSISRPSPPPYQHQYFPNSSIIFISPQPPPSSSSSSSSSSHHQFTRTFTSSGFSSINGTVLLAPHQMNRSSQSSDGKEPLTIEDETKAITSTNPKFQSANIAAALTSYVNTNNNGGSRNGLDCIFNQHQAASRSGYNSGSAYSDRSKLMLEQWKRKNLTIAPKESNL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci58g0002 461 SMART WRKY_cls 174 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci58g0002 461 Gene3D WRKY domain 158 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci58g0002 461 MobiDBLite consensus disorder prediction 316 338 - -
Prci58g0002 461 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 30 411 IPR044810 GO:0003700
Prci58g0002 461 ProSiteProfiles WRKY domain profile. 169 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci58g0002 461 MobiDBLite consensus disorder prediction 96 129 - -
Prci58g0002 461 FunFam probable WRKY transcription factor 31 159 236 - -
Prci58g0002 461 Pfam WRKY DNA -binding domain 175 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci58g0002 461 SUPERFAMILY WRKY DNA-binding domain 167 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci58g0002 461 MobiDBLite consensus disorder prediction 96 115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci58g0002 159 247 WRKY Transcription Factor Family AT1G68150 73.196 1.10e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci58g0002 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci58g0002 - - pcin:129295149 818.92