Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci579g0001 ATGGCTGGAAATTCAATTGGTGGAAATATTCCTGCTGAGATATTTCAGTTGAAAAAGTTGCAAAAGCTTGACCTATCATCAAACCAAATATCTGGTGAGATTCCACCACAAATCAGAAATGCCTCCATGTTATACCTTCTGAAGTTAAACAGAAACAATATTTCAGGTTTGATGCCTACAAGCTTTGGAAGTCTATCTAATTTAGAGTCATTAGACCTGTCAATGAACAGGCTAAGCGGATCCATTCCTTATCACATAGGGAATTGCTACAAGCTTGTCAATTTAAATTTGAGTCATAATGACTTCAATGGCACTATCCCATATCAAATTGGGAATCTTGACTCCTTGGAAGATTTCTTGGACTTGAGTTTTAATTCACTTTCTGGAGAAATCCCTGTGGACCTTATTAAGCTTGACAACTTGATAAGTCTGAATCTGTCTCATAACAATCTATCAGGTTTTATCCCTGATTCCCTTAGTACAATGTTGAGCTTGTCAAGCATCAACCTCTCTTACAACAATTTGGAGGGTCCTGCCCCAAATAGTGGCATATTTAATTCTTCTTATCCATTAGATTTGAGTAATAACAAAGATTTATGTGGGAGAATCCAAGGTTTGAGACCTTGCAATGTTTCAATATCACACATGGGAAGCACCAAAGAGAAAGTTGTGATATCTATTCTTGCTTCTTTAGCAGGTGCACTACTTGTTACATTGGTGTTAGTTGGGATTTTTTTTATTTGTTCAAAGGAAAACTCAAGAGTTTTAGAACAGAATTCAGGAACCAAGAAAGAAAGTCCATTTTCAGTCTGTCAATTTGATGGGAAAGATCTGTATAAAGACATTATTGAAGCAACAGAGAACTTTGATGGCAAGTATTGTGTTGGGGAAGGATCTTCTGGAAAAGTTTACAAAATGGTCATGCAAGGAGGTGAACAATTTGCTGTAAAGAAGTTTAGATGTGAAGAAGATGACATAGACATGGAAAGTTTAAAATCCTTCAAGAGTGAAATCAAAGCCATGACAGAAATCCGCCATCGAAACATTGTGAAGCTCTATGGATTTTGCTCACAAGGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGAGGGACTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTAGAGTTAGATTGGCCTAAAAGGGTGGATGTTGTCAAAGGTGTAGCACAAGCTTTATCTTATATGCATCATGATTGTGATCCACCAATTATTCATAGAGACATATCAAGCAATAATATATTATTGTCCGCAAATCTTGAAGCCCATGTCTCAGACTTTGGCACAGCAAGATTCCTGAAGGCTAGCTCATCATCAATTTGGACAACATTTGCTGGCACACGTGGGTATGCTGCTCCAGAACTAGCATATACAATGGCAGTATCTGAGAAATGTGATGTGTTTAGCTTTGGTGTATTGGCTTTTGAGATTATCATGGGAAAGCATCCCGGTGATTTAATTTCCCACATACAATCCGTTGATGCTCAAAGCATAAACTTCAATGAGATTCTAGATCCTCGTCTGTCACCTCCTACAAAGCAGAAAAGGCTGAAGGAAGTGACTTTGATTGCAGATCTTGCTCTTTCATGTTTACAGACAAACCCTTCATCTCGACCAACCATGCAAAGCATCGCTCAGATGATTTAA 1677 0.3787 MAGNSIGGNIPAEIFQLKKLQKLDLSSNQISGEIPPQIRNASMLYLLKLNRNNISGLMPTSFGSLSNLESLDLSMNRLSGSIPYHIGNCYKLVNLNLSHNDFNGTIPYQIGNLDSLEDFLDLSFNSLSGEIPVDLIKLDNLISLNLSHNNLSGFIPDSLSTMLSLSSINLSYNNLEGPAPNSGIFNSSYPLDLSNNKDLCGRIQGLRPCNVSISHMGSTKEKVVISILASLAGALLVTLVLVGIFFICSKENSRVLEQNSGTKKESPFSVCQFDGKDLYKDIIEATENFDGKYCVGEGSSGKVYKMVMQGGEQFAVKKFRCEEDDIDMESLKSFKSEIKAMTEIRHRNIVKLYGFCSQGSHTFAVYEYMEGGTLADFLKNDTKALELDWPKRVDVVKGVAQALSYMHHDCDPPIIHRDISSNNILLSANLEAHVSDFGTARFLKASSSSIWTTFAGTRGYAAPELAYTMAVSEKCDVFSFGVLAFEIIMGKHPGDLISHIQSVDAQSINFNEILDPRLSPPTKQKRLKEVTLIADLALSCLQTNPSSRPTMQSIAQMI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci579g0001 558 Gene3D Ribonuclease Inhibitor 1 216 IPR032675 -
Prci579g0001 558 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 83 209 - -
Prci579g0001 558 SUPERFAMILY L domain-like 2 201 - -
Prci579g0001 558 Pfam Leucine rich repeat 44 102 IPR001611 GO:0005515
Prci579g0001 558 PANTHER LEUCINE RICH REPEAT KINASE 2 6 557 - -
Prci579g0001 558 Pfam Protein kinase domain 295 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci579g0001 558 Gene3D Phosphorylase Kinase; domain 1 248 368 - -
Prci579g0001 558 Pfam Leucine Rich Repeat 19 38 IPR001611 GO:0005515
Prci579g0001 558 Pfam Leucine Rich Repeat 140 160 IPR001611 GO:0005515
Prci579g0001 558 SMART LRR_typ_2 162 187 IPR003591 -
Prci579g0001 558 SMART LRR_typ_2 65 89 IPR003591 -
Prci579g0001 558 SMART LRR_typ_2 138 161 IPR003591 -
Prci579g0001 558 SMART LRR_typ_2 17 41 IPR003591 -
Prci579g0001 558 SMART LRR_typ_2 42 64 IPR003591 -
Prci579g0001 558 Gene3D Transferase(Phosphotransferase) domain 1 369 558 - -
Prci579g0001 558 ProSitePatterns Tyrosine protein kinases specific active-site signature. 414 426 IPR008266 GO:0004672|GO:0006468
Prci579g0001 558 ProSiteProfiles Protein kinase domain profile. 289 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci579g0001 558 FunFam MDIS1-interacting receptor like kinase 2 369 558 - -
Prci579g0001 558 ProSiteProfiles Leucine-rich repeat profile. 140 161 IPR001611 GO:0005515
Prci579g0001 558 FunFam Leucine-rich repeat receptor protein kinase MSP1 251 368 - -
Prci579g0001 558 ProSitePatterns Protein kinases ATP-binding region signature. 295 318 IPR017441 GO:0005524
Prci579g0001 558 ProSiteProfiles Leucine-rich repeat profile. 19 41 IPR001611 GO:0005515
Prci579g0001 558 PRINTS Leucine-rich repeat signature 20 33 - -
Prci579g0001 558 PRINTS Leucine-rich repeat signature 65 78 - -
Prci579g0001 558 SUPERFAMILY Protein kinase-like (PK-like) 272 557 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci579g0001 1 463 Receptor kinase-like Gene Family AT4G08850 47.863 2.43e-133 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci579g0001 Pkinase 9.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci579g0001 - - gmx:100814345 752.281