LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci577g0003	ATGGCCGGCGTGTCCGTGTCGGATACGTATCCGACACGGACACGCATTCAGGACGGGGGAACGGCGTGTCCCTTTTCCCAGTTTCCGGCTGACGAGGGCGGATGCGGGTCGAGACGGGCAGAAGCGGGTCGGACATTTTTTTGCGTTTTTCACTTCACCGCCTGTGCTTCTAATTCTCGTTCTTCATCTCTCACGTTTATTCATGGTTCACGCTGCGTCGCTGCCTCACCCGCTCTGCTCTGCCTCTACCTATTCACAATTCACGTTGATTCTCGACCATCTGCTCTGCCTCTACCTCACCGTCGTTCTTCAGCTTCATTGACTGCGACACGGCTTCGGTGGATCAGGGAGCTGCTAGCTCCAGTGGTACGGTGTTTCCCGGCGAGAACGACCACACTGTGGAACCAGGTGGTGATAATTGGGTTAAAGGGAAATGATGCAGGATCTGTGGCGCGTGAGGAGAACGCGCCACCTAGATGTAGGAATTACCGAGGCGTGAGGCGTCGGCCGTGGGGAAAGTTCTCTGCGGAGATCCGGGAACCGCAGAGGAACGGGGCAAGGACATGGCTTGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTGGAAAAGCCAAGCTCAATTTCCCACACCTTATTGGATCGGAGCCACCGCCGGAGCCGGCAAGAGTGGTCATTAGAGAGAAGCGGTGCAGCTCGCTGGAACTTTCGTCGCCGTCTAACTGTACATCCGAGGATGATGGATCTCAAGGGTCAAGTAAGAAGATAAGCCTGGCCGGTCTATTGAACAAGTTAGCAACAAATGGAAGCCACGTCGGATTCCGTTGA	858	0.5513	MAGVSVSDTYPTRTRIQDGGTACPFSQFPADEGGCGSRRAEAGRTFFCVFHFTACASNSRSSSLTFIHGSRCVAASPALLCLYLFTIHVDSRPSALPLPHRRSSASLTATRLRWIRELLAPVVRCFPARTTTLWNQVVIIGLKGNDAGSVAREENAPPRCRNYRGVRRRPWGKFSAEIREPQRNGARTWLGTYESEEDAALAYDRAAFKMRGGKAKLNFPHLIGSEPPPEPARVVIREKRCSSLELSSPSNCTSEDDGSQGSSKKISLAGLLNKLATNGSHVGFR	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci577g0003	285	CDD	AP2	162	222	IPR001471	GO:0003700\|GO:0006355
	Prci577g0003	285	SMART	rav1_2	162	226	IPR001471	GO:0003700\|GO:0006355
	Prci577g0003	285	FunFam	Ethylene-responsive transcription factor 2	161	221	-	-
	Prci577g0003	285	SUPERFAMILY	DNA-binding domain	162	221	IPR016177	GO:0003677
	Prci577g0003	285	PRINTS	Ethylene responsive element binding protein signature	163	174	IPR001471	GO:0003700\|GO:0006355
	Prci577g0003	285	PRINTS	Ethylene responsive element binding protein signature	202	222	IPR001471	GO:0003700\|GO:0006355
	Prci577g0003	285	Pfam	AP2 domain	162	212	IPR001471	GO:0003700\|GO:0006355
	Prci577g0003	285	Gene3D	AP2/ERF domain	161	221	IPR036955	GO:0003700\|GO:0006355
	Prci577g0003	285	ProSiteProfiles	AP2/ERF domain profile.	162	220	IPR001471	GO:0003700\|GO:0006355
	Prci577g0003	285	PANTHER	DNA-BINDING DOMAIN	140	249	IPR044808	GO:0003700\|GO:0009873

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci577g0003	153	225	AP2-EREBP Transcription Factor Family	AT2G44840	67.059	1.17e-34	123

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2/ERF-ERF	Prci577g0003		AP2	3.2e-13	CL0081

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci577g0003	K09286		-	pcin:129296372	520.39