Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci577g0002 ATGTCATTTTCGGGCGGGAATAATGACGACGGCTTGAATTCAGGTGGCTATGACCATGATAACGTTACTGGTAATAACACAGGATCTGTGGCGTGTCAAAAGAACGCGCCATCTCGATGGAGCAATTACCGAGGAGTGAGGCGGCGGCCATGGGGGAAGTTCGCAGCGGAGATCCGGGACCCGAAGAGGAAAGCAAGGACATGGCTCGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCATGGCAGAAAAGCCAAGCTCAATTTCCCAAACCTTATTGGATCAGAGCCGCCGCCGGAGCCGGCAAGAGTAGTCATTGGAGAGAAGCGGGGCAGCTCGCCGGAACCTTCGTCGCCGTCATCTCAAGGGTCAAGTAAGAAGAGCCTTGCTGGCCTATTGAACAAGTTAGCAACAAATAGAAGCCATATCAGATTCTGTTGA 468 0.5214 MSFSGGNNDDGLNSGGYDHDNVTGNNTGSVACQKNAPSRWSNYRGVRRRPWGKFAAEIRDPKRKARTWLGTYESEEDAALAYDRAAFKMHGRKAKLNFPNLIGSEPPPEPARVVIGEKRGSSPEPSSPSSQGSSKKSLAGLLNKLATNRSHIRFC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci577g0002 155 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Prci577g0002 155 PRINTS Ethylene responsive element binding protein signature 81 101 IPR001471 GO:0003700|GO:0006355
Prci577g0002 155 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Prci577g0002 155 MobiDBLite consensus disorder prediction 18 35 - -
Prci577g0002 155 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Prci577g0002 155 MobiDBLite consensus disorder prediction 122 144 - -
Prci577g0002 155 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Prci577g0002 155 MobiDBLite consensus disorder prediction 98 144 - -
Prci577g0002 155 PANTHER DNA-BINDING DOMAIN 29 135 IPR044808 GO:0003700|GO:0009873
Prci577g0002 155 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Prci577g0002 155 SUPERFAMILY DNA-binding domain 41 100 IPR016177 GO:0003677
Prci577g0002 155 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Prci577g0002 155 MobiDBLite consensus disorder prediction 1 35 - -
Prci577g0002 155 FunFam Ethylene-responsive transcription factor 2 41 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci577g0002 42 136 AP2-EREBP Transcription Factor Family AT2G44840 64.583 6.36e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci577g0002 AP2 5.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci577g0002 K09286 - pcin:129296372 177.948