Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci577g0001 ATGATCCCTGATCTTTCTTCTTCTTTAGATTCAGTTCATCAATACCTTCTTGAAGATCATGATCCTTCCTCTATGACTCTCATGAATACCTTCTTCATGTTCAACAACCCTACTTTAAATTTAAACCCTAACTGCGACCCGGATGCTTCACCAGAGCAGGGTGCTAGTAATAACTCCAGTGGTACGGTGTTTTCCGGCGGCGAGTATGACACCGCCATGAAACAAGGTGATAGGGTTAGTGTTAACAATGCAGGATCTGTGGCGGGTGAATGTAAGGCGCCACCAAGATGGAGGAATTACAGAGGTGTGAGGCGGCGGCCATGGGGGAAGTTCGCAGCGGAGATCCGGGATCCCAAGAGGAACGGCGCCAGAACTTGGTTGGGAACTTATGAGAGGGAAGAGGATGCAGCTTTGGCGTATGATAGAGCTGCTTTCAAGATGAGAGGTAGAAAAGCAAAGCTCAATTTTCCTCACCTCATTGGATCGGAACCGCCACCGGAGCTGGCAAGAGTAGTCGTCGGAAAGAAGCGGCACCGCTCACTGGAACCTTCATCACCGTCAAACAGTACATCTGTGGATGACGGATCTCAAGGGTCATGCAAGAGGAAGAACCTGGCTGGGCTATTGAATAAGATAGCAACAAATGGAAACCTAAGTCAGAAGCTTGAAATGATGTTCAAGAAGGCATAG 690 0.4826 MIPDLSSSLDSVHQYLLEDHDPSSMTLMNTFFMFNNPTLNLNPNCDPDASPEQGASNNSSGTVFSGGEYDTAMKQGDRVSVNNAGSVAGECKAPPRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYEREEDAALAYDRAAFKMRGRKAKLNFPHLIGSEPPPELARVVVGKKRHRSLEPSSPSNSTSVDDGSQGSCKRKNLAGLLNKIATNGNLSQKLEMMFKKA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci577g0001 229 Pfam AP2 domain 99 149 IPR001471 GO:0003700|GO:0006355
Prci577g0001 229 SMART rav1_2 99 163 IPR001471 GO:0003700|GO:0006355
Prci577g0001 229 Gene3D AP2/ERF domain 98 158 IPR036955 GO:0003700|GO:0006355
Prci577g0001 229 MobiDBLite consensus disorder prediction 43 67 - -
Prci577g0001 229 PRINTS Ethylene responsive element binding protein signature 139 159 IPR001471 GO:0003700|GO:0006355
Prci577g0001 229 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Prci577g0001 229 MobiDBLite consensus disorder prediction 176 199 - -
Prci577g0001 229 MobiDBLite consensus disorder prediction 183 198 - -
Prci577g0001 229 SUPERFAMILY DNA-binding domain 99 158 IPR016177 GO:0003677
Prci577g0001 229 CDD AP2 99 159 IPR001471 GO:0003700|GO:0006355
Prci577g0001 229 PANTHER DNA-BINDING DOMAIN 72 194 IPR044808 GO:0003700|GO:0009873
Prci577g0001 229 FunFam Ethylene-responsive transcription factor 2 98 158 - -
Prci577g0001 229 MobiDBLite consensus disorder prediction 43 66 - -
Prci577g0001 229 ProSiteProfiles AP2/ERF domain profile. 99 157 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci577g0001 100 218 AP2-EREBP Transcription Factor Family AT2G44840 57.364 1.59e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci577g0001 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci577g0001 K09286 - pcin:129296372 213.001