Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci573g0001 ATGTCATTTTCGGGCGGGAATAATGACGAAGGTTTGAATTCAGGTGGCTATGACCATGATAACGTTACTGGTGATAACACAGGATCTGTGGCGTGTGAAAAGAACGCGCCATCTCGATGGAGCAATTACCGAGGAGTGAGGCGGCGGCCATGGGGGAAGTTCGCAGCGGAGATCCGGGACCCGAAGAGGAAAGCAAGGAAATGGCTCGGAACCTATGAGAGCGAGGAGGACGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGCATGGCAGAAAAGCCAGCTCAATTTCCCAAACCTTATTGGATCAGAGCCGCCGCCGGAGCCGGCAAGAGTAG 339 0.528 MSFSGGNNDEGLNSGGYDHDNVTGDNTGSVACEKNAPSRWSNYRGVRRRPWGKFAAEIRDPKRKARKWLGTYESEEDAALAYDRAAFKMHGRKASSISQTLLDQSRRRSRQE 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci573g0001 112 Pfam AP2 domain 42 91 IPR001471 GO:0003700|GO:0006355
Prci573g0001 112 Gene3D AP2/ERF domain 41 96 IPR036955 GO:0003700|GO:0006355
Prci573g0001 112 ProSiteProfiles AP2/ERF domain profile. 42 100 IPR001471 GO:0003700|GO:0006355
Prci573g0001 112 FunFam Ethylene-responsive transcription factor 2 41 97 - -
Prci573g0001 112 MobiDBLite consensus disorder prediction 19 34 - -
Prci573g0001 112 MobiDBLite consensus disorder prediction 93 112 - -
Prci573g0001 112 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Prci573g0001 112 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Prci573g0001 112 MobiDBLite consensus disorder prediction 1 34 - -
Prci573g0001 112 SUPERFAMILY DNA-binding domain 41 94 IPR016177 GO:0003677
Prci573g0001 112 CDD AP2 41 95 IPR001471 GO:0003700|GO:0006355
Prci573g0001 112 PANTHER DNA-BINDING DOMAIN 29 94 IPR044808 GO:0003700|GO:0009873
Prci573g0001 112 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci573g0001 25 94 AP2-EREBP Transcription Factor Family AT2G33710 58.571 2.00e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci573g0001 AP2 5.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci573g0001 K09286 - pcin:129296372 112.849