Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci561g0006 ATGGATAAACCAAAGACCGATCAGGTCGTCCTCTTCATCGACCACCTCAACACTGGTCATCCCTCCATGGAAACTCATCAGAACAACATAAACAATGACACCACCACCACCAACAAGCCCAAACTCACTTCCAGAGTCAAGACTCTCAATCGCCTGAGCTTCTCCAAACCCAAATCTCGCATCCAAGAACACTACCACCCACTCTACACCCAATTCACCGTCTCCGAAGAAGTCGAAGACATTGCCGGCCGGTATTCTTCCACCGACGACGAATGGAACGAAGACGACGATGAAGAAGAAGATCAGGTGGAGGAGGACGGCCCAAAGTCCAACGAGAAAACCAAACGTCGTCGTCGGAAGATTCAGTGGAAGCGCGTGGTTGAGTGGGCGTTGTTCCTCATCATATTAACCAGCTTGGTCTCTTGTCTCACCATTCCCTCCATCAAAACGAAGTATTCGTGGGGTTTGGAGATTTGGAAATGGTGCTTGATGGGGATGGTAACCTTCAGTGGACGCTTAGTCTCTGGTTGGCTCGTAGCTGTGTCCGTATTCATCATAGAGAGAAACTTCATGCTCAGAGAAAAGGTCTTATACTTCGTCTACGGTCTCAGAAAAAGCATCAGAAACTGCATATGGCTAGGCCTCGTGTTATTCTCGTACTGGACCGTCGTCTTCGACAACGTCCAGAAGAAAAATCACAAGTTCCTCAACAAGGTGTTTCAGGCGCTTGTGGCCGTCCTCGTCGGAGCCATAATCTGGCTCGTCAAGATCGTGCTGGTGAAAATGCTAGCCTCGTCGTTCCACGTCGCGACCTACTTCGACAGAATGAAAGAGAGCGTGTTCCATCACTACATACTGGACACACTCTCTGGGCCTCCCTTGGAGGAGAACGATGAAACGACGTCGCAGCATACTCTGACGGGGTCCAAGTCCATGCCGGCGAACTGGAAGGGAAGGCATAAAGCGATAAAGGAGGCGAAGAACTTGTACAAGTCGAAGAAGTTTGGGTCGAGGAAGATTGATATGGACAAGCTGAGAGAGCTGAGTATGAAGAGCACGGCGTCGGCGTGGAGTGTGAAGAGACTGGTGAACTACGTGAAGTCGTCGGGGTTGTCGACGATTTCCCGGACGATCGACGATTTCGGGAACGCCGAGTCTGAGATTTGCAGCGAGTGGGAAGCTCGGAATTGTGCTCAGAGGATTTTCAAGAACGTTGCTAAACCTGGTGCCAAGTATATTGAGGAGGAGGATCTCATGAGATTTTTGAAGAGAGTTGAGGTTCATACTATATTCCCACTCTTTGAAGGTGCCCTCGAAACTGGAAAGATCTCCAGGTCTTCCTTTAGAAATTGGGTGATTCGAGCTTATTATGAAAGAAAGGCTCTAGCACAATCACTGAATGACACAAAAACAGCAGTGCAACAGCTTCACAAGATAGCCAGCTCAATAGTGACAGTGATAATAATCGTAGTTCTCCTTTTGGTGATGGAGCTGGCTACAATCAAAGTGATACTTTTCGTCATTACACAGATAGTTCTGGTCGGGGTTGCCTTCCAAGGTACCTGCAAGACTGTGTTGGAGGCCATCATCTTCGTCTTTTGTCATGCACCCTTTTGA 1617 0.4861 MDKPKTDQVVLFIDHLNTGHPSMETHQNNINNDTTTTNKPKLTSRVKTLNRLSFSKPKSRIQEHYHPLYTQFTVSEEVEDIAGRYSSTDDEWNEDDDEEEDQVEEDGPKSNEKTKRRRRKIQWKRVVEWALFLIILTSLVSCLTIPSIKTKYSWGLEIWKWCLMGMVTFSGRLVSGWLVAVSVFIIERNFMLREKVLYFVYGLRKSIRNCIWLGLVLFSYWTVVFDNVQKKNHKFLNKVFQALVAVLVGAIIWLVKIVLVKMLASSFHVATYFDRMKESVFHHYILDTLSGPPLEENDETTSQHTLTGSKSMPANWKGRHKAIKEAKNLYKSKKFGSRKIDMDKLRELSMKSTASAWSVKRLVNYVKSSGLSTISRTIDDFGNAESEICSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEVHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKIASSIVTVIIIVVLLLVMELATIKVILFVITQIVLVGVAFQGTCKTVLEAIIFVFCHAPF 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci561g0006 538 MobiDBLite consensus disorder prediction 20 40 - -
Prci561g0006 538 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 538 IPR016688 -
Prci561g0006 538 MobiDBLite consensus disorder prediction 90 105 - -
Prci561g0006 538 MobiDBLite consensus disorder prediction 19 40 - -
Prci561g0006 538 MobiDBLite consensus disorder prediction 85 115 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci561g0006 21 538 Mechanosensitive Ion Channel Family AT5G12080 40.590 2.28e-124 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci561g0006 K22048 - gmx:100813521 719.539