Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci560g0001 ATGATCACAAAACACTCGCCTCTCATCCTTTTACTCGTTTTTCTCCTTCCCCTTATCCCGGTTCAATCAAACCGCCGCCACTGCCACCAAACATGCCGTCCGCACCGCTCCCCCGATGCCTTCCCCTACCCCTTTGGCTTCTCTTCCGGCTGCGCAATCCGACTCAACTGCAACCCCTCTGCCGGAATCCTCATAGGAGAATACCCGGTCCACTCCATTAACTCCGATACCATAATTGTCGGCGTCAAATCCCGATGCAATCGCCCGTTTCATACCTTCGGCCAACTCTTCAGCCATAGATACGCGCCCACGTCGCGAAACGCCATCCTTTTGCAAAACTGCAGCAAAACGGTCTCCCCATGCATCATCCCGGCGACCATGGTGCAGACTAGATTCGAGTCGAAAAACTGCAGCTCCGGCGGTGGCAATTTGAGTTGCTATTACGAAAACTCGACCGCTGATTTCATGAATCTCCAGAATTTAACAAACAAACACTGTACGTACCTCATGTCTTCGATAGCGGCTGAGGATTTAAGGAACAACTCGGATGTGAGTGCGGTGACAGCGGTATCATTGGAGGTTGAGACGATTGAGCTCGGATGGTGGCTGGAAGGAGAGTGCCAGTGTTCCAAGGATGCCAATTGTACGAGACTAAAATCGCCGATTGACAAGAAGCCAGGGTACCGGTGCCGTTGCAAGGAAGGATTCACGGGCGACGGGTACTTGGCCGGAAGTGGTTGTCGGAAAGACTCTTCAACCTGCAACCCTGCAAAGTACATGTCTGGCCAATGTGGAGGGGCAACCAGATTTGTTGTCTTGATTGGAGGAATGGTTTTTGGAGCTTCGTTAATGATCGGTTTGGGCCTAATATGTTGTTTCTTTAGGCGGCGCTCCAAATTAAGAGTCACCAAGAGCACAAAAAGGCGCTTGACTGAAGCTACTAGCAATTACAGCGTTCCTATTTATACCTATAAAGACATTGAGAGAGCCACGAATAACTTCTCTGAGAAACAGAGGCTTGGAACTGGGGCATATGGGACTGTTTATGCTGGAAAGCTTCACAATGACAAATGGGTTGCCATTAAAAGGATCAAATATAGAGACACTGACAGCATCGAGAAAGTAATGAACGAGATCAAGCTCATTTCCTCTGTGAGCCATCCCAATCTAGTCCGCTTGTTGGGTTGCTCTCTCGAATACGGAGAACAAATCCTTGTCTACGAGTTCATGCCCAATGGAACATTAAATCAACATCTGTTGAGGGAGAGAGGGATTGGGCTCCCATGGTCGGTTCGACTCACTATTGCTGCTGAAACAGCACGAGCCATAGCACACCTCCACTCTGCCATTGATCCCCCCATTTACCACAGGGACATTAAGTCAAGCAACATACTGTTGGACAACAATTTTAGATCCAAAGTGGCAGATTTTGGTCTTTCAAGGCCTGGAATGACCGAAATATCCCACGTTTCAACTGCCCCGCAAGGAACGCCTGGCTATGTTGATCCACAATACCATCAAGATTTCCACCTTTCTGATAAAAGTGACGTTTACAGCTTTGGGGTTGTACTTGTTGAGATCCTAACAGGATTGAAAGTGGTGGACTTTACTCGTCCCCAGAATGCAGTGAATTTGGCTTCTTTTGCTACGGACAGGATAGGGAAGGGGCTTTTGTATGAGATTATAGATCCATTCCTGGAAGCACATAACGATGATTGGACACATTTCTCCATACACAAGGTAGCCGAGCTAGCATTTCGCTGCCTCGCATTCCACAGGGACATGAGGCCTTCAATGACAGAAGTGGCTGCTGAGCTAGAGCAGATCAGACTGAGTAGGTGGACAACCTTTGAAGACAGCAATCGAATAGCCTCAACGGAGTTGTCCTCTTCTTCTCCTTCCTCTGATGAGAGTGAGAAGCCTCTGAGTGTGAAAGAAAATACGGTAGGACCGGAGGGCAAAGGGCTTCTCAAGTTGCAGACTAAGCCTGCCGCGTTAAACTTAATGGAAAGGCCGAAGAGCTCTCCGGTCTCGGTGCAAGACCCAGATTTTTGGCTGAGCGAACAAAGCTCTCCTTCATCGAATAGTTTGCTGAGTAAAAAATCATTCGAGTGA 2115 0.4842 MITKHSPLILLLVFLLPLIPVQSNRRHCHQTCRPHRSPDAFPYPFGFSSGCAIRLNCNPSAGILIGEYPVHSINSDTIIVGVKSRCNRPFHTFGQLFSHRYAPTSRNAILLQNCSKTVSPCIIPATMVQTRFESKNCSSGGGNLSCYYENSTADFMNLQNLTNKHCTYLMSSIAAEDLRNNSDVSAVTAVSLEVETIELGWWLEGECQCSKDANCTRLKSPIDKKPGYRCRCKEGFTGDGYLAGSGCRKDSSTCNPAKYMSGQCGGATRFVVLIGGMVFGASLMIGLGLICCFFRRRSKLRVTKSTKRRLTEATSNYSVPIYTYKDIERATNNFSEKQRLGTGAYGTVYAGKLHNDKWVAIKRIKYRDTDSIEKVMNEIKLISSVSHPNLVRLLGCSLEYGEQILVYEFMPNGTLNQHLLRERGIGLPWSVRLTIAAETARAIAHLHSAIDPPIYHRDIKSSNILLDNNFRSKVADFGLSRPGMTEISHVSTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEILTGLKVVDFTRPQNAVNLASFATDRIGKGLLYEIIDPFLEAHNDDWTHFSIHKVAELAFRCLAFHRDMRPSMTEVAAELEQIRLSRWTTFEDSNRIASTELSSSSPSSDESEKPLSVKENTVGPEGKGLLKLQTKPAALNLMERPKSSPVSVQDPDFWLSEQSSPSSNSLLSKKSFE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci560g0001 704 SMART serkin_6 334 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci560g0001 704 FunFam Wall-associated receptor kinase-like 14 isoform A 207 242 - -
Prci560g0001 704 FunFam Wall-associated receptor kinase-like 20 410 619 - -
Prci560g0001 704 CDD EGF 206 241 - -
Prci560g0001 704 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Prci560g0001 704 Gene3D Transferase(Phosphotransferase) domain 1 410 629 - -
Prci560g0001 704 Gene3D Laminin 207 242 - -
Prci560g0001 704 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 652 IPR044652 GO:0004672
Prci560g0001 704 ProSiteProfiles Protein kinase domain profile. 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci560g0001 704 MobiDBLite consensus disorder prediction 680 704 - -
Prci560g0001 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Prci560g0001 704 Pfam Protein kinase domain 334 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci560g0001 704 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Prci560g0001 704 MobiDBLite consensus disorder prediction 625 704 - -
Prci560g0001 704 FunFam Wall-associated receptor kinase-like 14 301 409 - -
Prci560g0001 704 SUPERFAMILY Protein kinase-like (PK-like) 310 607 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci560g0001 1 698 Receptor kinase-like Gene Family AT2G23450 50.210 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci560g0001 Pkinase 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci560g0001 - - gmx:100809858 937.947