Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci555g0001 ATGTCAGGTGGCCTAAAGGGTTCTATTGGGTATATTCCACCAGAGTATGGTATGGGCGGACAACCTTCAACACTAGGAGATATCTACAGCTATGGGATACTATTACTGGAGATTTTCACAGGAAAAAGACCCACAAATGATGAATTTGAAGGCGGGATGGAAATTCACCAGTATGTGGCAATGGCTTTACCCAATGAAGCCTTGGAGATAGCTGATCCTTCCTTGCTACCTGAAGAAGAAGATAAGATGAAGAGATATACTTGGAGGAGAGAGCAATAA 279 0.4265 MSGGLKGSIGYIPPEYGMGGQPSTLGDIYSYGILLLEIFTGKRPTNDEFEGGMEIHQYVAMALPNEALEIADPSLLPEEEDKMKRYTWRREQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci555g0001 92 SUPERFAMILY Protein kinase-like (PK-like) 4 68 IPR011009 -
Prci555g0001 92 Pfam Protein tyrosine and serine/threonine kinase 4 47 IPR001245 GO:0004672|GO:0006468
Prci555g0001 92 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci555g0001 92 Gene3D Transferase(Phosphotransferase) domain 1 1 90 - -
Prci555g0001 92 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 5 82 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci555g0001 2 76 Receptor kinase-like Gene Family AT3G47580 58.667 1.80e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci555g0001 PK_Tyr_Ser-Thr 4.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci555g0001 - - pcin:129297582 192.971