Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci545g0001 ATGTCTGATAGTAATCCTCCAAGACCACCAGATTCACCGGAGAGCGACTTCACAAACCAGTATCCTTTTGCTGAGGTCTCTGAATTCTTCAACTTCGAAGACGATGAGGAACCCGAGCAATCAATAATGGCTCCTGAACAAGTCCCGAATCAGCAGGTCTGTCAAACCAATGAAGTAAGTGGATTTGGGGGAAGTACTGCCAACCCTTTCGAGGGGTCATCTAGTAGAGACATTGGCAGTAGTGGCGAGATCAACATCAAAGACAGAGTCGCATTCAAAACGAAGTCAGAGGTAGAGATTCTGGACGATGGGTACAAGTGGAGAAAATATGGGAAGAAGAGGGTGAAGAACAGCCCCAACCCGAGGAATTACTATAGGTGTTCGGTGGAGGGATGTCCGGTGAAAAAGAGAGTTGAGAGAGATAAGGATGATTCAAGGTATGTTATAACAACCTACGAAGGTGTACACACCCACCCAAGCTTTAGCTAG 489 0.4642 MSDSNPPRPPDSPESDFTNQYPFAEVSEFFNFEDDEEPEQSIMAPEQVPNQQVCQTNEVSGFGGSTANPFEGSSSRDIGSSGEINIKDRVAFKTKSEVEILDDGYKWRKYGKKRVKNSPNPRNYYRCSVEGCPVKKRVERDKDDSRYVITTYEGVHTHPSFS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci545g0001 162 MobiDBLite consensus disorder prediction 1 20 - -
Prci545g0001 162 Gene3D WRKY domain 88 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci545g0001 162 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci545g0001 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 159 IPR044810 GO:0003700
Prci545g0001 162 FunFam WRKY transcription factor 57 87 161 - -
Prci545g0001 162 MobiDBLite consensus disorder prediction 57 81 - -
Prci545g0001 162 SUPERFAMILY WRKY DNA-binding domain 94 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci545g0001 162 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci545g0001 162 Pfam WRKY DNA -binding domain 102 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci545g0001 89 161 WRKY Transcription Factor Family AT5G26170 79.452 7.03e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci545g0001 WRKY 6.9e-25 CL0274