Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci53g0005 ATGGCTCCCTCGTCTCCGATCGGTGCTCATTCTCATCCCTCGTCAATGGCTCCCGAAACCATGGAGAACAACATTCAGCCATTTTATGTCCTTCACAAAGCTTCATCTCGAGGAAAAGATAGAAAATCTACAGGATATGGAAGAAAGAGAAGGAGAAAAGAGGCACCTTCATCACTGCAAAGCCCTAAGAAACTTGACAGGAGTATTGCGGAAGAACATGATGGCCATCATCTTCAGCAATTGCAATTTGAAGCATTTTGCTTTATTTGGTCAAAAATTGAGTCAACTATCAAGGATGTTTTGAGAGATATCAATGCTGGTGTTTTTGATGAAATACGACAATGGGTTCTGGCATGCTTCGATGCTACTAGAGCAACTGGAGAACCTAGCTTTGCCAACTCAACTGGATCTTTCCCTGTTCTGAACACAAGTACTCCTAGCCAGCTATTCACTGGGTTGGTTATTACCAAAAACGTGGAGTTTGTTGATGACATTTTGACATTTGAAGAGCTTAGTCTCTTTTTGAAATCGCAAGGCTGCCATGTGGGTAAGCTATCATCATTAGACTTTTCAGTGAAAAATGGGATTGCTGGTTGCCTAAAGGCTTTGTTGCGAGAGTTTATGGACACCACTATAGATTCAGCTGATATATCAAACTTAGCGTCATGGTATAGAGAACAAGGAAACTACAATAAACCTCTGGTTCTAATAATTAATGATTTGGAAAGATGCTCTAGGTCGGTCTTAACTGATTTTATCCCCATGTTATGTGAATGGGTAAACAGGGTGCCGATTATCTTAATATTTGGAGTTACGACCACAGTGGATTCCCTAAGAAGCATTCTTCCATCACATGTTCTTCACCATTTGTGCCCCTGTAAGTTTATGCTTGGATCACCAGCTGAGAGAATGGATTCAATTATTGAGACTGTTCTTGTGAAGCATTGCACTATATTCAGTATTGGTTACAAAGTGGCACTATTTCTTAGAAACAACTTCTTAAACAGGGATGGGACATTAACTTCTTTTATCCGAGCTTTGAAGATATCTTGCATGTTACATTTCTCTGTGGAGCCTCTGAGTCTTATACTTAGCCAAATACTTGCTGAAGAAGACCAGGATGGAAAATTTGCATTATCACCTGATACAGTGTTGAAGTTTGTGCATGAACTTCCACCGTGTGCAAGGAATCGAATGGCTGATGAGACTGGGAGAAATTTAGCCCAAGGCTTGGCAAATTTGGTTATTGCAATGAAGCTTTGGAGCACTGCAGTCTTGTGCCTGCATGAAGCTGGAAAATATAACAGAATTCGACTGCTGGACTTGTTTTGTGAAGCACTCAATTCAGATTTGTTCCCATCAAGGGCTTCTGATTGTCAGGTGTCAAACAAAAATGATTGTGGCTTGTCCTCATCCAGTTCCTACCAACAGTGTGCTATTATTCAAAAGGATGGTTTTATCTCCCAGATAGTCCGCAAAGTGAGGGATCTTCCTCCTGCAATGTTATTTCAGTTGATTAAGAGCTGGGAAAAATGTACTGAGGGTGTTGTTGAGATTCATGACAAATTAAAAACGTTGCAATCTTCACTAAGATGTGAAGATGGACAATGGCCAACCAAGATTTCTGACGTTTCCAAGAAACATGCAACCAGGATTTCATTAAACAGTGAGGACTCAAGAGTCTTAAATTCACAGGTTGTGACATTCATGAATGACTTGATCAGGAGTTATATCAGGCCCATTTCATGCATGCCTTTCCATGAAATTTTCTGTTTTAATGAGGCTGAGAAGCTACAAATGGCTCTCACTGGAGATCCAAGAAGCAGAATTCAAGTTGATCTTTTGGACTTCAATAAAATTTTGCGGTGCAGTTGCTGTAAAAAGAGTAGCTCTGCCCTATTGCCATCCATGCATGATTCCTCAATCATGTATTCCCTGGCTGAGGAGCACGGTGATCTGATTAATCTTCATGACTGGTTCAAGTCTTTTAAAACAATTATTCTTGACCAAAAGAATAAACGCAAACAAAAGTTGAAGCAATCCCCCCATAAAAGGAAGAGAAAGGATACAAATGAATCTAGTGATCCAAGTGAAGCATCAATTCAAGCACGCTTTTGCAATGCAGTTACAGAGTTGCAGATAATTGGCGTACTTAGAATGCCCAGCAAGAGACGCCCTGATTGTGTACAGAGAGTGGCCTTTGGACTTTGA 2211 0.4052 MAPSSPIGAHSHPSSMAPETMENNIQPFYVLHKASSRGKDRKSTGYGRKRRRKEAPSSLQSPKKLDRSIAEEHDGHHLQQLQFEAFCFIWSKIESTIKDVLRDINAGVFDEIRQWVLACFDATRATGEPSFANSTGSFPVLNTSTPSQLFTGLVITKNVEFVDDILTFEELSLFLKSQGCHVGKLSSLDFSVKNGIAGCLKALLREFMDTTIDSADISNLASWYREQGNYNKPLVLIINDLERCSRSVLTDFIPMLCEWVNRVPIILIFGVTTTVDSLRSILPSHVLHHLCPCKFMLGSPAERMDSIIETVLVKHCTIFSIGYKVALFLRNNFLNRDGTLTSFIRALKISCMLHFSVEPLSLILSQILAEEDQDGKFALSPDTVLKFVHELPPCARNRMADETGRNLAQGLANLVIAMKLWSTAVLCLHEAGKYNRIRLLDLFCEALNSDLFPSRASDCQVSNKNDCGLSSSSSYQQCAIIQKDGFISQIVRKVRDLPPAMLFQLIKSWEKCTEGVVEIHDKLKTLQSSLRCEDGQWPTKISDVSKKHATRISLNSEDSRVLNSQVVTFMNDLIRSYIRPISCMPFHEIFCFNEAEKLQMALTGDPRSRIQVDLLDFNKILRCSCCKKSSSALLPSMHDSSIMYSLAEEHGDLINLHDWFKSFKTIILDQKNKRKQKLKQSPHKRKRKDTNESSDPSEASIQARFCNAVTELQIIGVLRMPSKRRPDCVQRVAFGL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci53g0005 736 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 20 735 IPR020795 GO:0003677|GO:0005664|GO:0006260
Prci53g0005 736 MobiDBLite consensus disorder prediction 673 698 - -
Prci53g0005 736 Pfam Origin recognition complex winged helix C-terminal 607 734 IPR040855 -
Prci53g0005 736 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 69 362 IPR045667 -
Prci53g0005 736 CDD Orc3 81 734 - -
Prci53g0005 736 MobiDBLite consensus disorder prediction 50 67 - -
Prci53g0005 736 MobiDBLite consensus disorder prediction 8 22 - -
Prci53g0005 736 MobiDBLite consensus disorder prediction 1 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci53g0005 1 705 Core DNA Replication Machinery Family AT5G16690 43.310 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci53g0005 K02605 - gmx:100780646 941.414