Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci534g0004 ATGATTAAGCATTTCAACGAATCATACATGCCCGGATTCAATTATCTCTCTCATCCTCAACATTCTTCCACTTTAGCAGCAATCAGGCAGCACCTTCTCGGCAACGAAATGGCCGACCAGCTGCCTCCATCTTCTCCAGCAACACTTTCCGACGACATCTCATTGCACGGCCAGAGCTCAATGTATGACAGTCATTGCATCAGCGAACTAGTAGTTCCTGATGTTTCCACCATTAATAACAATATCAGTGCAGATGCTGCAGTGGCGCTTGAGTGTAACGCACCTCCAGTTGAGCGGTGCTACCGGGGTGTTAGGAGGCGGCCTTGGGGGAAATACGCAGCAGAGATCAGAGATCCGGCTAAAAACGGCGCTAGGATTTGGCTCGGAACTTTTGATACAGCTGAGGATGCAGCTATTGCTTATGACAGAGCAGCTTATGAGATGCGTGGAGCTAAAGCCAAGCTTAATTTTCCTCTCCTTGTGGGCTCCAACGTGTGGGATTTGGTTCGACCGAGTCGGAAGCGGGGCATGGCCGGCGGCGGCGAGGAGTATTCTTCAAAGCTCAAGCGGATAAGGAAGAGTGAGGCCTGA 591 0.5076 MIKHFNESYMPGFNYLSHPQHSSTLAAIRQHLLGNEMADQLPPSSPATLSDDISLHGQSSMYDSHCISELVVPDVSTINNNISADAAVALECNAPPVERCYRGVRRRPWGKYAAEIRDPAKNGARIWLGTFDTAEDAAIAYDRAAYEMRGAKAKLNFPLLVGSNVWDLVRPSRKRGMAGGGEEYSSKLKRIRKSEA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci534g0004 196 ProSiteProfiles AP2/ERF domain profile. 100 158 IPR001471 GO:0003700|GO:0006355
Prci534g0004 196 FunFam Ethylene-responsive transcription factor 2 99 159 - -
Prci534g0004 196 Pfam AP2 domain 100 150 IPR001471 GO:0003700|GO:0006355
Prci534g0004 196 CDD AP2 101 158 IPR001471 GO:0003700|GO:0006355
Prci534g0004 196 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Prci534g0004 196 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Prci534g0004 196 SMART rav1_2 100 164 IPR001471 GO:0003700|GO:0006355
Prci534g0004 196 MobiDBLite consensus disorder prediction 175 196 - -
Prci534g0004 196 PANTHER DNA-BINDING DOMAIN 85 174 IPR044808 GO:0003700|GO:0009873
Prci534g0004 196 Gene3D AP2/ERF domain 100 160 IPR036955 GO:0003700|GO:0006355
Prci534g0004 196 SUPERFAMILY DNA-binding domain 100 159 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci534g0004 101 190 AP2-EREBP Transcription Factor Family AT2G44840 61.957 1.20e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci534g0004 AP2 8.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci534g0004 K09286 - pcin:129297492 198.749